In this package, there are two solvers available to you, solvers for ODEs from the GNU Scientific Library (called via the .Call interface), and a C implementation of the Gillespie algorithm. Here we show how these are used on one of the included examples.

We make heavy use of closures: functions that were created in an environment with access to implicit arguments such as simulation experiments. The created closures have an explicit argument, such as the Markov chain variable parMCMC, which in some way maps to the parameters that the model can be simulated with parModel.

We assume that simulations require lots of arguments, but only one of them will change every once in a while, the parMCMC variable; the simulation experiments (initial state vector, input parameters, output times, etc.) remain the same, and so does the model structure.

This closure approach allows you to hijack the procedure at any point by constructing your own simulation closure that uses your solver of convenience and/or necessity. You can write a function that accepts a parMCMC vector and calls the solvers from the deSolve package. Just make sure to package the simulation results in the same way as our solvers do.

Typically a simulation result y has this structure: y[[i]] is the simulation of ex[[i]] (where ex is the list of simulation experiments, with data from the real experiments). Each y[[i]] has the fields: state, func, status, cpuSeconds, numSteps. Only state and func have scientific relevance. The func array (3d-array), contains the measurable quantities for this model (the observables): y[[i]]$func[j,k,l] is experiment i, output function j, time-point k value for parameter set l if you are simulating several parameter vectors in one call (otherwise l is exactly 1).

Load the AKAP79 Model

This model is included with the package. To load your own model (also a collection of TSV files) call model_from_tsv() with a character-vector of file names or the name of the directory that contains the TSV files. To use an example model included with the package, we use uqsa_example():

m <- model_from_tsv(uqsa_example("AKAP79"))
o <- as_ode(m)
#> Loading required namespace: pracma
c_path(o) <- write_c_code(generate_code(o))
so_path(o) <- shlib(o)
print(o)
#>                 Model name : AKAP79
#>                     C file : /tmp/RtmpzuedpY/b316367e5f817645/AKAP79.c [2026-09-14 18:44:17.688947]
#>             shared library : /tmp/RtmpzuedpY/b316367e5f817645/AKAP79.so [2026-09-14 18:44:17.688947]
#>  Number of state variables : 11
#>       Number of parameters : 33
#>          Number of outputs : 1
#>          Conservation laws : 5
#>            Transformations : yes
if (!file.exists(so_path(o))) stop('creation of shared library failed')

By default, as_ode performs a conservation law analysis that can be turned off with as_ode(o,cla=FALSE).

With conservation laws, some species are calculated algebraically. Their initial values are turned into input parameters (using the found law):

With this hypothetical relationship ($c$ is a constant):

\[A+B = c\,,\]

we can determine that

\[c = A_0 + B_0\,.\]

And thus we can replace either of the two species:

\[A(t) = A_0 + B_0 - B(t)\]

And $A_0+B_0$ are turned into an input called A_ConservedConst (the $c$ above) with the value determined from the stated, experiment specific, initial condition.

Load Experiments (data)

This list of data-sets also includes instructions for the simulator on how to simulate the scenario with the model.

ex <- experiments(m,o)
#> Warning in experiments(m, o): CONFLICT: This model seems to have event based
#> transformations and conservation laws. These two concepts clash with one
#> another if a compound is conserved, but also changed by scheduled events.

We supply both m and o because o contains information about whether or not conservation law analysis has occurred. With conservation law analysis, we must adjust the input vector for the simulation experiment and reduce the initial state for each simulation to the dynamic variables rather (without the ones determined algebraically). Currently, there is no way to influence which variables are replaced by algebraic constraints. This can be inconvenient if you are relying very heavily on the state component of the result y[[i]]$state (where some variables are now missing, due to conservation laws). This is why you should rely on the func component of the return value. This directly corresponds to the m$Output table: the observable/measurable quantities for this model. If you need to compare substance A to the data (in some way), then add an output function for it (e.g. A_out or A_obs with a value of A). Then it doesn’t matter whether the conservation law analysis removes A from the state space; it remains part of the func component.

Simulate

This will make a function s, which will always simulate the scenarios described in the experiments list, but for user supplied parameters. The parameters in the tables are supplied in log10-space, this is because the author of tat file intends to sample in log10-space. This way the parameters are guaranteed to be positive and we can very quickly sample several orders of magnitude for each parameter. The simulator accepts a function in the parMap slot, which can do any arbitrary transformation between the values you supply to the simulator and the values it supplies the model with: the model will be simulated with parModel <- parMap(p), where p is what we call the simulator with. If the sampling is done in log10 space, then the model accepts 10^p. This package has a set of functions that perform this reverse transformation from sampling space to model-parameter space, based on which transformation the user performed in the model files: log10ParMap belongs to a log10 sampling space and performs 10^p (to get back to the model-parameters):

stopifnot(all(m$Parameter$scale=="log10")) # just to make sure
opt <- options(mc.cores = 2)               # required by CRAN to be 2, set this to a bigger value for yourself
s <- simulator.c(ex,o,parMap=log10ParMap)

p0 <- values(m$Parameter) # default parameters, in log10-space
rprior <- rNormalPrior(p0,rep(0.1,length(p0))) # a small neighborhood
y <- s(t(rprior(300)))
status <- unlist(lapply(y,\(E) as.logical(E$status))) # non-zero means an error occurred
print(status)
#>          EX11____0nM__TRUE___TRUE1          EX11____0nM__TRUE___TRUE2 
#>                              FALSE                              FALSE 
#>          EX11____0nM__TRUE___TRUE3          EX11____0nM__TRUE___TRUE4 
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#>        EX33__200nM_FALSE__FALSE227        EX33__200nM_FALSE__FALSE228 
#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE229        EX33__200nM_FALSE__FALSE230 
#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE231        EX33__200nM_FALSE__FALSE232 
#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE233        EX33__200nM_FALSE__FALSE234 
#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE235        EX33__200nM_FALSE__FALSE236 
#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE237        EX33__200nM_FALSE__FALSE238 
#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE241        EX33__200nM_FALSE__FALSE242 
#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE243        EX33__200nM_FALSE__FALSE244 
#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
#>        EX33__200nM_FALSE__FALSE249        EX33__200nM_FALSE__FALSE250 
#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>         EX42__500nM__TRUE__FALSE77         EX42__500nM__TRUE__FALSE78 
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#>         EX42__500nM__TRUE__FALSE79         EX42__500nM__TRUE__FALSE80 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE81         EX42__500nM__TRUE__FALSE82 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE83         EX42__500nM__TRUE__FALSE84 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE85         EX42__500nM__TRUE__FALSE86 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE87         EX42__500nM__TRUE__FALSE88 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE89         EX42__500nM__TRUE__FALSE90 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE91         EX42__500nM__TRUE__FALSE92 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE93         EX42__500nM__TRUE__FALSE94 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE95         EX42__500nM__TRUE__FALSE96 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE97         EX42__500nM__TRUE__FALSE98 
#>                              FALSE                              FALSE 
#>         EX42__500nM__TRUE__FALSE99        EX42__500nM__TRUE__FALSE100 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE101        EX42__500nM__TRUE__FALSE102 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE103        EX42__500nM__TRUE__FALSE104 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE105        EX42__500nM__TRUE__FALSE106 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE107        EX42__500nM__TRUE__FALSE108 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE109        EX42__500nM__TRUE__FALSE110 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE111        EX42__500nM__TRUE__FALSE112 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE113        EX42__500nM__TRUE__FALSE114 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE115        EX42__500nM__TRUE__FALSE116 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE117        EX42__500nM__TRUE__FALSE118 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE119        EX42__500nM__TRUE__FALSE120 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE121        EX42__500nM__TRUE__FALSE122 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE123        EX42__500nM__TRUE__FALSE124 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE125        EX42__500nM__TRUE__FALSE126 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE127        EX42__500nM__TRUE__FALSE128 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE129        EX42__500nM__TRUE__FALSE130 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE131        EX42__500nM__TRUE__FALSE132 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE133        EX42__500nM__TRUE__FALSE134 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE135        EX42__500nM__TRUE__FALSE136 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE137        EX42__500nM__TRUE__FALSE138 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE139        EX42__500nM__TRUE__FALSE140 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE141        EX42__500nM__TRUE__FALSE142 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE143        EX42__500nM__TRUE__FALSE144 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE145        EX42__500nM__TRUE__FALSE146 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE147        EX42__500nM__TRUE__FALSE148 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE149        EX42__500nM__TRUE__FALSE150 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE151        EX42__500nM__TRUE__FALSE152 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE153        EX42__500nM__TRUE__FALSE154 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE155        EX42__500nM__TRUE__FALSE156 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE157        EX42__500nM__TRUE__FALSE158 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE159        EX42__500nM__TRUE__FALSE160 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE161        EX42__500nM__TRUE__FALSE162 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE163        EX42__500nM__TRUE__FALSE164 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE165        EX42__500nM__TRUE__FALSE166 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE167        EX42__500nM__TRUE__FALSE168 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE169        EX42__500nM__TRUE__FALSE170 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE171        EX42__500nM__TRUE__FALSE172 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE173        EX42__500nM__TRUE__FALSE174 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE175        EX42__500nM__TRUE__FALSE176 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE177        EX42__500nM__TRUE__FALSE178 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE179        EX42__500nM__TRUE__FALSE180 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE181        EX42__500nM__TRUE__FALSE182 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE183        EX42__500nM__TRUE__FALSE184 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE185        EX42__500nM__TRUE__FALSE186 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE187        EX42__500nM__TRUE__FALSE188 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE189        EX42__500nM__TRUE__FALSE190 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE191        EX42__500nM__TRUE__FALSE192 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE193        EX42__500nM__TRUE__FALSE194 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE195        EX42__500nM__TRUE__FALSE196 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE197        EX42__500nM__TRUE__FALSE198 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE199        EX42__500nM__TRUE__FALSE200 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE201        EX42__500nM__TRUE__FALSE202 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE203        EX42__500nM__TRUE__FALSE204 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE205        EX42__500nM__TRUE__FALSE206 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE207        EX42__500nM__TRUE__FALSE208 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE209        EX42__500nM__TRUE__FALSE210 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE211        EX42__500nM__TRUE__FALSE212 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE213        EX42__500nM__TRUE__FALSE214 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE215        EX42__500nM__TRUE__FALSE216 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE217        EX42__500nM__TRUE__FALSE218 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE219        EX42__500nM__TRUE__FALSE220 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE221        EX42__500nM__TRUE__FALSE222 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE223        EX42__500nM__TRUE__FALSE224 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE225        EX42__500nM__TRUE__FALSE226 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE227        EX42__500nM__TRUE__FALSE228 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE229        EX42__500nM__TRUE__FALSE230 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE231        EX42__500nM__TRUE__FALSE232 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE233        EX42__500nM__TRUE__FALSE234 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE235        EX42__500nM__TRUE__FALSE236 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE237        EX42__500nM__TRUE__FALSE238 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE239        EX42__500nM__TRUE__FALSE240 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE241        EX42__500nM__TRUE__FALSE242 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE243        EX42__500nM__TRUE__FALSE244 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE245        EX42__500nM__TRUE__FALSE246 
#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE279        EX42__500nM__TRUE__FALSE280 
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#>        EX42__500nM__TRUE__FALSE281        EX42__500nM__TRUE__FALSE282 
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#>        EX42__500nM__TRUE__FALSE297        EX42__500nM__TRUE__FALSE298 
#>                              FALSE                              FALSE 
#>        EX42__500nM__TRUE__FALSE299        EX42__500nM__TRUE__FALSE300 
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#>          EX43__500nM_FALSE__FALSE1          EX43__500nM_FALSE__FALSE2 
#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>        EX43__500nM_FALSE__FALSE229        EX43__500nM_FALSE__FALSE230 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE231        EX43__500nM_FALSE__FALSE232 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE233        EX43__500nM_FALSE__FALSE234 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE235        EX43__500nM_FALSE__FALSE236 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE237        EX43__500nM_FALSE__FALSE238 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE239        EX43__500nM_FALSE__FALSE240 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE241        EX43__500nM_FALSE__FALSE242 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE243        EX43__500nM_FALSE__FALSE244 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE245        EX43__500nM_FALSE__FALSE246 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE247        EX43__500nM_FALSE__FALSE248 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE249        EX43__500nM_FALSE__FALSE250 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE251        EX43__500nM_FALSE__FALSE252 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE253        EX43__500nM_FALSE__FALSE254 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE255        EX43__500nM_FALSE__FALSE256 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE257        EX43__500nM_FALSE__FALSE258 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE259        EX43__500nM_FALSE__FALSE260 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE261        EX43__500nM_FALSE__FALSE262 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE263        EX43__500nM_FALSE__FALSE264 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE265        EX43__500nM_FALSE__FALSE266 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE267        EX43__500nM_FALSE__FALSE268 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE269        EX43__500nM_FALSE__FALSE270 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE271        EX43__500nM_FALSE__FALSE272 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE273        EX43__500nM_FALSE__FALSE274 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE275        EX43__500nM_FALSE__FALSE276 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE277        EX43__500nM_FALSE__FALSE278 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE279        EX43__500nM_FALSE__FALSE280 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE281        EX43__500nM_FALSE__FALSE282 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE283        EX43__500nM_FALSE__FALSE284 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE285        EX43__500nM_FALSE__FALSE286 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE287        EX43__500nM_FALSE__FALSE288 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE289        EX43__500nM_FALSE__FALSE290 
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#>        EX43__500nM_FALSE__FALSE291        EX43__500nM_FALSE__FALSE292 
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#>        EX43__500nM_FALSE__FALSE293        EX43__500nM_FALSE__FALSE294 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE295        EX43__500nM_FALSE__FALSE296 
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#>        EX43__500nM_FALSE__FALSE297        EX43__500nM_FALSE__FALSE298 
#>                              FALSE                              FALSE 
#>        EX43__500nM_FALSE__FALSE299        EX43__500nM_FALSE__FALSE300 
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#>          EX51_1000nM__TRUE___TRUE1          EX51_1000nM__TRUE___TRUE2 
#>                              FALSE                              FALSE 
#>          EX51_1000nM__TRUE___TRUE3          EX51_1000nM__TRUE___TRUE4 
#>                              FALSE                              FALSE 
#>          EX51_1000nM__TRUE___TRUE5          EX51_1000nM__TRUE___TRUE6 
#>                              FALSE                              FALSE 
#>          EX51_1000nM__TRUE___TRUE7          EX51_1000nM__TRUE___TRUE8 
#>                              FALSE                              FALSE 
#>          EX51_1000nM__TRUE___TRUE9         EX51_1000nM__TRUE___TRUE10 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE11         EX51_1000nM__TRUE___TRUE12 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE13         EX51_1000nM__TRUE___TRUE14 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE15         EX51_1000nM__TRUE___TRUE16 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE17         EX51_1000nM__TRUE___TRUE18 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE19         EX51_1000nM__TRUE___TRUE20 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE21         EX51_1000nM__TRUE___TRUE22 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE23         EX51_1000nM__TRUE___TRUE24 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE25         EX51_1000nM__TRUE___TRUE26 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE27         EX51_1000nM__TRUE___TRUE28 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE29         EX51_1000nM__TRUE___TRUE30 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE31         EX51_1000nM__TRUE___TRUE32 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE33         EX51_1000nM__TRUE___TRUE34 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE35         EX51_1000nM__TRUE___TRUE36 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE37         EX51_1000nM__TRUE___TRUE38 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE39         EX51_1000nM__TRUE___TRUE40 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE41         EX51_1000nM__TRUE___TRUE42 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE43         EX51_1000nM__TRUE___TRUE44 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE45         EX51_1000nM__TRUE___TRUE46 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE47         EX51_1000nM__TRUE___TRUE48 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE49         EX51_1000nM__TRUE___TRUE50 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE51         EX51_1000nM__TRUE___TRUE52 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE53         EX51_1000nM__TRUE___TRUE54 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE55         EX51_1000nM__TRUE___TRUE56 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE57         EX51_1000nM__TRUE___TRUE58 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE59         EX51_1000nM__TRUE___TRUE60 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE61         EX51_1000nM__TRUE___TRUE62 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE63         EX51_1000nM__TRUE___TRUE64 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE65         EX51_1000nM__TRUE___TRUE66 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE67         EX51_1000nM__TRUE___TRUE68 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE69         EX51_1000nM__TRUE___TRUE70 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE71         EX51_1000nM__TRUE___TRUE72 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE73         EX51_1000nM__TRUE___TRUE74 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE75         EX51_1000nM__TRUE___TRUE76 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE77         EX51_1000nM__TRUE___TRUE78 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE79         EX51_1000nM__TRUE___TRUE80 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE81         EX51_1000nM__TRUE___TRUE82 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE83         EX51_1000nM__TRUE___TRUE84 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE85         EX51_1000nM__TRUE___TRUE86 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE87         EX51_1000nM__TRUE___TRUE88 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE89         EX51_1000nM__TRUE___TRUE90 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE91         EX51_1000nM__TRUE___TRUE92 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE93         EX51_1000nM__TRUE___TRUE94 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE95         EX51_1000nM__TRUE___TRUE96 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE97         EX51_1000nM__TRUE___TRUE98 
#>                              FALSE                              FALSE 
#>         EX51_1000nM__TRUE___TRUE99        EX51_1000nM__TRUE___TRUE100 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE101        EX51_1000nM__TRUE___TRUE102 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE103        EX51_1000nM__TRUE___TRUE104 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE105        EX51_1000nM__TRUE___TRUE106 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE107        EX51_1000nM__TRUE___TRUE108 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE109        EX51_1000nM__TRUE___TRUE110 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE111        EX51_1000nM__TRUE___TRUE112 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE113        EX51_1000nM__TRUE___TRUE114 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE115        EX51_1000nM__TRUE___TRUE116 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE117        EX51_1000nM__TRUE___TRUE118 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE119        EX51_1000nM__TRUE___TRUE120 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE121        EX51_1000nM__TRUE___TRUE122 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE123        EX51_1000nM__TRUE___TRUE124 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE125        EX51_1000nM__TRUE___TRUE126 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE127        EX51_1000nM__TRUE___TRUE128 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE129        EX51_1000nM__TRUE___TRUE130 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE131        EX51_1000nM__TRUE___TRUE132 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE133        EX51_1000nM__TRUE___TRUE134 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE135        EX51_1000nM__TRUE___TRUE136 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE137        EX51_1000nM__TRUE___TRUE138 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE139        EX51_1000nM__TRUE___TRUE140 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE141        EX51_1000nM__TRUE___TRUE142 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE143        EX51_1000nM__TRUE___TRUE144 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE145        EX51_1000nM__TRUE___TRUE146 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE147        EX51_1000nM__TRUE___TRUE148 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE149        EX51_1000nM__TRUE___TRUE150 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE151        EX51_1000nM__TRUE___TRUE152 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE153        EX51_1000nM__TRUE___TRUE154 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE155        EX51_1000nM__TRUE___TRUE156 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE157        EX51_1000nM__TRUE___TRUE158 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE159        EX51_1000nM__TRUE___TRUE160 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE161        EX51_1000nM__TRUE___TRUE162 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE163        EX51_1000nM__TRUE___TRUE164 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE165        EX51_1000nM__TRUE___TRUE166 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE167        EX51_1000nM__TRUE___TRUE168 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE169        EX51_1000nM__TRUE___TRUE170 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE171        EX51_1000nM__TRUE___TRUE172 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE173        EX51_1000nM__TRUE___TRUE174 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE175        EX51_1000nM__TRUE___TRUE176 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE177        EX51_1000nM__TRUE___TRUE178 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE179        EX51_1000nM__TRUE___TRUE180 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE181        EX51_1000nM__TRUE___TRUE182 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE183        EX51_1000nM__TRUE___TRUE184 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE185        EX51_1000nM__TRUE___TRUE186 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE187        EX51_1000nM__TRUE___TRUE188 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE189        EX51_1000nM__TRUE___TRUE190 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE191        EX51_1000nM__TRUE___TRUE192 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE193        EX51_1000nM__TRUE___TRUE194 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE195        EX51_1000nM__TRUE___TRUE196 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE197        EX51_1000nM__TRUE___TRUE198 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE199        EX51_1000nM__TRUE___TRUE200 
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#>        EX51_1000nM__TRUE___TRUE201        EX51_1000nM__TRUE___TRUE202 
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#>        EX51_1000nM__TRUE___TRUE203        EX51_1000nM__TRUE___TRUE204 
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#>        EX51_1000nM__TRUE___TRUE205        EX51_1000nM__TRUE___TRUE206 
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#>        EX51_1000nM__TRUE___TRUE207        EX51_1000nM__TRUE___TRUE208 
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#>        EX51_1000nM__TRUE___TRUE209        EX51_1000nM__TRUE___TRUE210 
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#>        EX51_1000nM__TRUE___TRUE211        EX51_1000nM__TRUE___TRUE212 
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#>        EX51_1000nM__TRUE___TRUE215        EX51_1000nM__TRUE___TRUE216 
#>                              FALSE                              FALSE 
#>        EX51_1000nM__TRUE___TRUE217        EX51_1000nM__TRUE___TRUE218 
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#>        EX51_1000nM__TRUE___TRUE219        EX51_1000nM__TRUE___TRUE220 
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#>         EX52_1000nM__TRUE__FALSE81         EX52_1000nM__TRUE__FALSE82 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE83         EX52_1000nM__TRUE__FALSE84 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE85         EX52_1000nM__TRUE__FALSE86 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE87         EX52_1000nM__TRUE__FALSE88 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE89         EX52_1000nM__TRUE__FALSE90 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE91         EX52_1000nM__TRUE__FALSE92 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE93         EX52_1000nM__TRUE__FALSE94 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE95         EX52_1000nM__TRUE__FALSE96 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE97         EX52_1000nM__TRUE__FALSE98 
#>                              FALSE                              FALSE 
#>         EX52_1000nM__TRUE__FALSE99        EX52_1000nM__TRUE__FALSE100 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE101        EX52_1000nM__TRUE__FALSE102 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE103        EX52_1000nM__TRUE__FALSE104 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE105        EX52_1000nM__TRUE__FALSE106 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE107        EX52_1000nM__TRUE__FALSE108 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE109        EX52_1000nM__TRUE__FALSE110 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE111        EX52_1000nM__TRUE__FALSE112 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE113        EX52_1000nM__TRUE__FALSE114 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE115        EX52_1000nM__TRUE__FALSE116 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE117        EX52_1000nM__TRUE__FALSE118 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE119        EX52_1000nM__TRUE__FALSE120 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE121        EX52_1000nM__TRUE__FALSE122 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE123        EX52_1000nM__TRUE__FALSE124 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE125        EX52_1000nM__TRUE__FALSE126 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE127        EX52_1000nM__TRUE__FALSE128 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE129        EX52_1000nM__TRUE__FALSE130 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE131        EX52_1000nM__TRUE__FALSE132 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE133        EX52_1000nM__TRUE__FALSE134 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE135        EX52_1000nM__TRUE__FALSE136 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE137        EX52_1000nM__TRUE__FALSE138 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE139        EX52_1000nM__TRUE__FALSE140 
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#>        EX52_1000nM__TRUE__FALSE141        EX52_1000nM__TRUE__FALSE142 
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#>        EX52_1000nM__TRUE__FALSE143        EX52_1000nM__TRUE__FALSE144 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE145        EX52_1000nM__TRUE__FALSE146 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE147        EX52_1000nM__TRUE__FALSE148 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE149        EX52_1000nM__TRUE__FALSE150 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE151        EX52_1000nM__TRUE__FALSE152 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE153        EX52_1000nM__TRUE__FALSE154 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE155        EX52_1000nM__TRUE__FALSE156 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE157        EX52_1000nM__TRUE__FALSE158 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE159        EX52_1000nM__TRUE__FALSE160 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE161        EX52_1000nM__TRUE__FALSE162 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE163        EX52_1000nM__TRUE__FALSE164 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE165        EX52_1000nM__TRUE__FALSE166 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE167        EX52_1000nM__TRUE__FALSE168 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE169        EX52_1000nM__TRUE__FALSE170 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE171        EX52_1000nM__TRUE__FALSE172 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE173        EX52_1000nM__TRUE__FALSE174 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE175        EX52_1000nM__TRUE__FALSE176 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE177        EX52_1000nM__TRUE__FALSE178 
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#>        EX52_1000nM__TRUE__FALSE179        EX52_1000nM__TRUE__FALSE180 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE181        EX52_1000nM__TRUE__FALSE182 
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#>        EX52_1000nM__TRUE__FALSE183        EX52_1000nM__TRUE__FALSE184 
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#>        EX52_1000nM__TRUE__FALSE185        EX52_1000nM__TRUE__FALSE186 
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#>        EX52_1000nM__TRUE__FALSE187        EX52_1000nM__TRUE__FALSE188 
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#>        EX52_1000nM__TRUE__FALSE189        EX52_1000nM__TRUE__FALSE190 
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#>        EX52_1000nM__TRUE__FALSE191        EX52_1000nM__TRUE__FALSE192 
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#>        EX52_1000nM__TRUE__FALSE193        EX52_1000nM__TRUE__FALSE194 
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#>        EX52_1000nM__TRUE__FALSE195        EX52_1000nM__TRUE__FALSE196 
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#>        EX52_1000nM__TRUE__FALSE197        EX52_1000nM__TRUE__FALSE198 
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#>        EX52_1000nM__TRUE__FALSE199        EX52_1000nM__TRUE__FALSE200 
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#>        EX52_1000nM__TRUE__FALSE201        EX52_1000nM__TRUE__FALSE202 
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#>        EX52_1000nM__TRUE__FALSE203        EX52_1000nM__TRUE__FALSE204 
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#>        EX52_1000nM__TRUE__FALSE205        EX52_1000nM__TRUE__FALSE206 
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#>        EX52_1000nM__TRUE__FALSE207        EX52_1000nM__TRUE__FALSE208 
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#>        EX52_1000nM__TRUE__FALSE209        EX52_1000nM__TRUE__FALSE210 
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#>        EX52_1000nM__TRUE__FALSE211        EX52_1000nM__TRUE__FALSE212 
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#>        EX52_1000nM__TRUE__FALSE213        EX52_1000nM__TRUE__FALSE214 
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#>        EX52_1000nM__TRUE__FALSE215        EX52_1000nM__TRUE__FALSE216 
#>                              FALSE                              FALSE 
#>        EX52_1000nM__TRUE__FALSE217        EX52_1000nM__TRUE__FALSE218 
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#>        EX52_1000nM__TRUE__FALSE219        EX52_1000nM__TRUE__FALSE220 
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#>        EX52_1000nM__TRUE__FALSE221        EX52_1000nM__TRUE__FALSE222 
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#>        EX52_1000nM__TRUE__FALSE223        EX52_1000nM__TRUE__FALSE224 
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#>        EX52_1000nM__TRUE__FALSE225        EX52_1000nM__TRUE__FALSE226 
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#>        EX52_1000nM__TRUE__FALSE227        EX52_1000nM__TRUE__FALSE228 
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#>        EX52_1000nM__TRUE__FALSE229        EX52_1000nM__TRUE__FALSE230 
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#>        EX52_1000nM__TRUE__FALSE231        EX52_1000nM__TRUE__FALSE232 
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#>        EX52_1000nM__TRUE__FALSE233        EX52_1000nM__TRUE__FALSE234 
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#>        EX52_1000nM__TRUE__FALSE235        EX52_1000nM__TRUE__FALSE236 
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#>        EX52_1000nM__TRUE__FALSE237        EX52_1000nM__TRUE__FALSE238 
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#>        EX52_1000nM__TRUE__FALSE239        EX52_1000nM__TRUE__FALSE240 
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#>        EX52_1000nM__TRUE__FALSE241        EX52_1000nM__TRUE__FALSE242 
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#>        EX52_1000nM__TRUE__FALSE243        EX52_1000nM__TRUE__FALSE244 
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#>        EX52_1000nM__TRUE__FALSE245        EX52_1000nM__TRUE__FALSE246 
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#>        EX52_1000nM__TRUE__FALSE247        EX52_1000nM__TRUE__FALSE248 
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#>        EX52_1000nM__TRUE__FALSE249        EX52_1000nM__TRUE__FALSE250 
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#>        EX52_1000nM__TRUE__FALSE251        EX52_1000nM__TRUE__FALSE252 
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#>        EX52_1000nM__TRUE__FALSE253        EX52_1000nM__TRUE__FALSE254 
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#>        EX52_1000nM__TRUE__FALSE255        EX52_1000nM__TRUE__FALSE256 
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#>        EX52_1000nM__TRUE__FALSE263        EX52_1000nM__TRUE__FALSE264 
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#>        EX52_1000nM__TRUE__FALSE265        EX52_1000nM__TRUE__FALSE266 
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#>        EX52_1000nM__TRUE__FALSE269        EX52_1000nM__TRUE__FALSE270 
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#>        EX52_1000nM__TRUE__FALSE271        EX52_1000nM__TRUE__FALSE272 
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#>        EX52_1000nM__TRUE__FALSE273        EX52_1000nM__TRUE__FALSE274 
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#>        EX52_1000nM__TRUE__FALSE275        EX52_1000nM__TRUE__FALSE276 
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#>        EX52_1000nM__TRUE__FALSE277        EX52_1000nM__TRUE__FALSE278 
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#>        EX52_1000nM__TRUE__FALSE281        EX52_1000nM__TRUE__FALSE282 
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#>        EX52_1000nM__TRUE__FALSE283        EX52_1000nM__TRUE__FALSE284 
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#>        EX52_1000nM__TRUE__FALSE285        EX52_1000nM__TRUE__FALSE286 
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#>        EX52_1000nM__TRUE__FALSE287        EX52_1000nM__TRUE__FALSE288 
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#>        EX52_1000nM__TRUE__FALSE289        EX52_1000nM__TRUE__FALSE290 
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#>        EX52_1000nM__TRUE__FALSE291        EX52_1000nM__TRUE__FALSE292 
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#>        EX52_1000nM__TRUE__FALSE293        EX52_1000nM__TRUE__FALSE294 
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#>        EX52_1000nM__TRUE__FALSE297        EX52_1000nM__TRUE__FALSE298 
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#>        EX52_1000nM__TRUE__FALSE299        EX52_1000nM__TRUE__FALSE300 
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#>          EX53_1000nM_FALSE__FALSE1          EX53_1000nM_FALSE__FALSE2 
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#>                              FALSE                              FALSE 
#>         EX62_2000nM__TRUE__FALSE89         EX62_2000nM__TRUE__FALSE90 
#>                              FALSE                              FALSE 
#>         EX62_2000nM__TRUE__FALSE91         EX62_2000nM__TRUE__FALSE92 
#>                              FALSE                              FALSE 
#>         EX62_2000nM__TRUE__FALSE93         EX62_2000nM__TRUE__FALSE94 
#>                              FALSE                              FALSE 
#>         EX62_2000nM__TRUE__FALSE95         EX62_2000nM__TRUE__FALSE96 
#>                              FALSE                              FALSE 
#>         EX62_2000nM__TRUE__FALSE97         EX62_2000nM__TRUE__FALSE98 
#>                              FALSE                              FALSE 
#>         EX62_2000nM__TRUE__FALSE99        EX62_2000nM__TRUE__FALSE100 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE101        EX62_2000nM__TRUE__FALSE102 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE103        EX62_2000nM__TRUE__FALSE104 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE105        EX62_2000nM__TRUE__FALSE106 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE107        EX62_2000nM__TRUE__FALSE108 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE109        EX62_2000nM__TRUE__FALSE110 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE111        EX62_2000nM__TRUE__FALSE112 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE113        EX62_2000nM__TRUE__FALSE114 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE115        EX62_2000nM__TRUE__FALSE116 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE117        EX62_2000nM__TRUE__FALSE118 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE119        EX62_2000nM__TRUE__FALSE120 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE121        EX62_2000nM__TRUE__FALSE122 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE123        EX62_2000nM__TRUE__FALSE124 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE125        EX62_2000nM__TRUE__FALSE126 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE127        EX62_2000nM__TRUE__FALSE128 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE129        EX62_2000nM__TRUE__FALSE130 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE131        EX62_2000nM__TRUE__FALSE132 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE133        EX62_2000nM__TRUE__FALSE134 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE135        EX62_2000nM__TRUE__FALSE136 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE137        EX62_2000nM__TRUE__FALSE138 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE139        EX62_2000nM__TRUE__FALSE140 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE141        EX62_2000nM__TRUE__FALSE142 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE143        EX62_2000nM__TRUE__FALSE144 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE145        EX62_2000nM__TRUE__FALSE146 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE147        EX62_2000nM__TRUE__FALSE148 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE149        EX62_2000nM__TRUE__FALSE150 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE151        EX62_2000nM__TRUE__FALSE152 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE153        EX62_2000nM__TRUE__FALSE154 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE155        EX62_2000nM__TRUE__FALSE156 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE157        EX62_2000nM__TRUE__FALSE158 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE159        EX62_2000nM__TRUE__FALSE160 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE161        EX62_2000nM__TRUE__FALSE162 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE163        EX62_2000nM__TRUE__FALSE164 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE165        EX62_2000nM__TRUE__FALSE166 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE167        EX62_2000nM__TRUE__FALSE168 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE169        EX62_2000nM__TRUE__FALSE170 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE171        EX62_2000nM__TRUE__FALSE172 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE173        EX62_2000nM__TRUE__FALSE174 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE175        EX62_2000nM__TRUE__FALSE176 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE177        EX62_2000nM__TRUE__FALSE178 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE179        EX62_2000nM__TRUE__FALSE180 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE181        EX62_2000nM__TRUE__FALSE182 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE183        EX62_2000nM__TRUE__FALSE184 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE185        EX62_2000nM__TRUE__FALSE186 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE187        EX62_2000nM__TRUE__FALSE188 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE189        EX62_2000nM__TRUE__FALSE190 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE191        EX62_2000nM__TRUE__FALSE192 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE193        EX62_2000nM__TRUE__FALSE194 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE195        EX62_2000nM__TRUE__FALSE196 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE197        EX62_2000nM__TRUE__FALSE198 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE199        EX62_2000nM__TRUE__FALSE200 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE201        EX62_2000nM__TRUE__FALSE202 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE203        EX62_2000nM__TRUE__FALSE204 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE205        EX62_2000nM__TRUE__FALSE206 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE207        EX62_2000nM__TRUE__FALSE208 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE209        EX62_2000nM__TRUE__FALSE210 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE211        EX62_2000nM__TRUE__FALSE212 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE213        EX62_2000nM__TRUE__FALSE214 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE215        EX62_2000nM__TRUE__FALSE216 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE217        EX62_2000nM__TRUE__FALSE218 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE219        EX62_2000nM__TRUE__FALSE220 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE221        EX62_2000nM__TRUE__FALSE222 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE223        EX62_2000nM__TRUE__FALSE224 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE225        EX62_2000nM__TRUE__FALSE226 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE227        EX62_2000nM__TRUE__FALSE228 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE229        EX62_2000nM__TRUE__FALSE230 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE231        EX62_2000nM__TRUE__FALSE232 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE233        EX62_2000nM__TRUE__FALSE234 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE235        EX62_2000nM__TRUE__FALSE236 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE237        EX62_2000nM__TRUE__FALSE238 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE239        EX62_2000nM__TRUE__FALSE240 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE241        EX62_2000nM__TRUE__FALSE242 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE243        EX62_2000nM__TRUE__FALSE244 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE245        EX62_2000nM__TRUE__FALSE246 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE247        EX62_2000nM__TRUE__FALSE248 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE249        EX62_2000nM__TRUE__FALSE250 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE251        EX62_2000nM__TRUE__FALSE252 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE253        EX62_2000nM__TRUE__FALSE254 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE255        EX62_2000nM__TRUE__FALSE256 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE257        EX62_2000nM__TRUE__FALSE258 
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#>        EX62_2000nM__TRUE__FALSE259        EX62_2000nM__TRUE__FALSE260 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE261        EX62_2000nM__TRUE__FALSE262 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE263        EX62_2000nM__TRUE__FALSE264 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE265        EX62_2000nM__TRUE__FALSE266 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE267        EX62_2000nM__TRUE__FALSE268 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE269        EX62_2000nM__TRUE__FALSE270 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE271        EX62_2000nM__TRUE__FALSE272 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE273        EX62_2000nM__TRUE__FALSE274 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE275        EX62_2000nM__TRUE__FALSE276 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE277        EX62_2000nM__TRUE__FALSE278 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE279        EX62_2000nM__TRUE__FALSE280 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE281        EX62_2000nM__TRUE__FALSE282 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE283        EX62_2000nM__TRUE__FALSE284 
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#>        EX62_2000nM__TRUE__FALSE285        EX62_2000nM__TRUE__FALSE286 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE287        EX62_2000nM__TRUE__FALSE288 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE289        EX62_2000nM__TRUE__FALSE290 
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#>        EX62_2000nM__TRUE__FALSE291        EX62_2000nM__TRUE__FALSE292 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE293        EX62_2000nM__TRUE__FALSE294 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE295        EX62_2000nM__TRUE__FALSE296 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE297        EX62_2000nM__TRUE__FALSE298 
#>                              FALSE                              FALSE 
#>        EX62_2000nM__TRUE__FALSE299        EX62_2000nM__TRUE__FALSE300 
#>                              FALSE                              FALSE 
#>          EX63_2000nM_FALSE__FALSE1          EX63_2000nM_FALSE__FALSE2 
#>                              FALSE                              FALSE 
#>          EX63_2000nM_FALSE__FALSE3          EX63_2000nM_FALSE__FALSE4 
#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#>                              FALSE                              FALSE 
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#> EX71___dose__TRUE___TRUE_dose_6221 EX71___dose__TRUE___TRUE_dose_6222 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6223 EX71___dose__TRUE___TRUE_dose_6224 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6225 EX71___dose__TRUE___TRUE_dose_6226 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6227 EX71___dose__TRUE___TRUE_dose_6228 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6229 EX71___dose__TRUE___TRUE_dose_6230 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6231 EX71___dose__TRUE___TRUE_dose_6232 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6233 EX71___dose__TRUE___TRUE_dose_6234 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6235 EX71___dose__TRUE___TRUE_dose_6236 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6237 EX71___dose__TRUE___TRUE_dose_6238 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6239 EX71___dose__TRUE___TRUE_dose_6240 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6241 EX71___dose__TRUE___TRUE_dose_6242 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6243 EX71___dose__TRUE___TRUE_dose_6244 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6245 EX71___dose__TRUE___TRUE_dose_6246 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6247 EX71___dose__TRUE___TRUE_dose_6248 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6249 EX71___dose__TRUE___TRUE_dose_6250 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6251 EX71___dose__TRUE___TRUE_dose_6252 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6253 EX71___dose__TRUE___TRUE_dose_6254 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6255 EX71___dose__TRUE___TRUE_dose_6256 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6257 EX71___dose__TRUE___TRUE_dose_6258 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6259 EX71___dose__TRUE___TRUE_dose_6260 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6261 EX71___dose__TRUE___TRUE_dose_6262 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6263 EX71___dose__TRUE___TRUE_dose_6264 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6265 EX71___dose__TRUE___TRUE_dose_6266 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6267 EX71___dose__TRUE___TRUE_dose_6268 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6269 EX71___dose__TRUE___TRUE_dose_6270 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6271 EX71___dose__TRUE___TRUE_dose_6272 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6273 EX71___dose__TRUE___TRUE_dose_6274 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6275 EX71___dose__TRUE___TRUE_dose_6276 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6277 EX71___dose__TRUE___TRUE_dose_6278 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6279 EX71___dose__TRUE___TRUE_dose_6280 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6281 EX71___dose__TRUE___TRUE_dose_6282 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6283 EX71___dose__TRUE___TRUE_dose_6284 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6285 EX71___dose__TRUE___TRUE_dose_6286 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6287 EX71___dose__TRUE___TRUE_dose_6288 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6289 EX71___dose__TRUE___TRUE_dose_6290 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6291 EX71___dose__TRUE___TRUE_dose_6292 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6293 EX71___dose__TRUE___TRUE_dose_6294 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6295 EX71___dose__TRUE___TRUE_dose_6296 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6297 EX71___dose__TRUE___TRUE_dose_6298 
#>                              FALSE                              FALSE 
#> EX71___dose__TRUE___TRUE_dose_6299 EX71___dose__TRUE___TRUE_dose_6300 
#>                              FALSE                              FALSE
if (any(status)) stop("simulation failed.")

Next we plot the result:

e.g. <- 18
plot(
    as.errors(ex[[e.g.]]$outputTimes), # exact
    ex[[e.g.]]$data,                   # uncertain
    xlab="time",
    ylab="AKAR4p",
    main=sprintf("AKAP79 model, expr. %i: %s",e.g.,names(ex)[e.g.]),
    ylim=c(90,200)
)
matplot(
    ex[[e.g.]]$outputTimes,
    y[[e.g.]]$func['AKAR4pOUT',,],
    lwd=2,                                   # fat
    col=rgb(200,0,255,12,maxColorValue=255), # low opacity
    lty=1,                                   # solid
    type="l",                                # line
    add=TRUE
)

There is also a specialized plot function for simulations, but we subset the simulation results:

print(class(y))
#> [1] "simulation"
oldpar <- par()      # remember graphics values
on.exit(par(oldpar)) # restore original values
#> Warning in par(oldpar): graphical parameter "cin" cannot be set
#> Warning in par(oldpar): graphical parameter "cra" cannot be set
#> Warning in par(oldpar): graphical parameter "csi" cannot be set
#> Warning in par(oldpar): graphical parameter "cxy" cannot be set
#> Warning in par(oldpar): graphical parameter "din" cannot be set
#> Warning in par(oldpar): graphical parameter "page" cannot be set
par(mfrow=c(3,2))
plot(ex[seq(6)],y[seq(6)],ylim=c(90,140))

#> NULL

This is an overview of the simulation:

print(y)
#> number of simulation experiments: 25
#>                   EX11____0nM__TRUE___TRUE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX12____0nM__TRUE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX13____0nM_FALSE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX21__100nM__TRUE___TRUE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX22__100nM__TRUE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX23__100nM_FALSE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX31__200nM__TRUE___TRUE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX32__200nM__TRUE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX33__200nM_FALSE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX41__500nM__TRUE___TRUE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX42__500nM__TRUE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX43__500nM_FALSE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX51_1000nM__TRUE___TRUE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX52_1000nM__TRUE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX53_1000nM_FALSE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX61_2000nM__TRUE___TRUE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX62_2000nM__TRUE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX63_2000nM_FALSE__FALSE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 125, 300 (dim)
#>                     func: 1, 125, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>                   EX72__event__TRUE___TRUE 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 6, 300 (dim)
#>                     func: 1, 6, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>            EX71___dose__TRUE___TRUE_dose_1 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 1, 300 (dim)
#>                     func: 1, 1, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>            EX71___dose__TRUE___TRUE_dose_2 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 1, 300 (dim)
#>                     func: 1, 1, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>            EX71___dose__TRUE___TRUE_dose_3 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 1, 300 (dim)
#>                     func: 1, 1, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>            EX71___dose__TRUE___TRUE_dose_4 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 1, 300 (dim)
#>                     func: 1, 1, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>            EX71___dose__TRUE___TRUE_dose_5 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 1, 300 (dim)
#>                     func: 1, 1, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#>            EX71___dose__TRUE___TRUE_dose_6 
#> ------------------------------------------ 
#>               cpuSeconds: numeric (class), double (type)
#>                 numSteps: integer (class), integer (type)
#>                   status: integer (class), integer (type)
#>                    state: 11, 1, 300 (dim)
#>                     func: 1, 1, 300 (dim)
#>            logLikelihood: NULL (class), NULL (type)
#>        gradLogLikelihood: NULL (class), NULL (type)
#>        FisherInformation: NULL (class), NULL (type)
#> 
#> experiments:  EX11____0nM__TRUE___TRUE, EX12____0nM__TRUE__FALSE, EX13____0nM_FALSE__FALSE, EX21__100nM__TRUE___TRUE, EX22__100nM__TRUE__FALSE, EX23__100nM_FALSE__FALSE, EX31__200nM__TRUE___TRUE, EX32__200nM__TRUE__FALSE, EX33__200nM_FALSE__FALSE, EX41__500nM__TRUE___TRUE, EX42__500nM__TRUE__FALSE, EX43__500nM_FALSE__FALSE, EX51_1000nM__TRUE___TRUE, EX52_1000nM__TRUE__FALSE, EX53_1000nM_FALSE__FALSE, EX61_2000nM__TRUE___TRUE, EX62_2000nM__TRUE__FALSE, EX63_2000nM_FALSE__FALSE, EX72__event__TRUE___TRUE, EX71___dose__TRUE___TRUE_dose_1, EX71___dose__TRUE___TRUE_dose_2, EX71___dose__TRUE___TRUE_dose_3, EX71___dose__TRUE___TRUE_dose_4, EX71___dose__TRUE___TRUE_dose_5, EX71___dose__TRUE___TRUE_dose_6

Reset options:

options(opt) # restores original values

Simulate Models

Load the AKAP79 Model

Load Experiments (data)

Simulate