pandemonium: High Dimensional Analysis in Linked Spaces
A 'shiny' GUI that performs high dimensional cluster analysis. This tool performs data preparation, clustering and visualisation within a dynamic GUI. With interactive methods allowing the user to change settings all without having to to leave the GUI. An earlier version of this package was described in Laa and Valencia (2022) <doi:10.1140/epjp/s13360-021-02310-1>.
| Version: | 1.0.0 |
| Depends: | R (≥ 3.5) |
| Imports: | tourr (≥ 1.2.6), stats, tibble (≥ 3.3.1), ggplot2 (≥ 4.0.0), RColorBrewer, dplyr, dendextend (≥ 1.19.1), fpc, shiny (≥ 1.13.0), shinythemes (≥ 1.2.0), shinyFeedback (≥ 0.4.0), DT (≥ 0.34.0), tidyr (≥ 1.3.2), tidyselect (≥ 1.2.1), magrittr (≥ 2.0.4), detourr (≥ 0.2.0), crosstalk (≥ 1.2.2), Rtsne (≥ 0.17), plotly (≥ 4.12.0), alphahull (≥ 2.5), uwot (≥ 0.2.4), ggpcp (≥ 0.2.0), rlang (≥ 1.1.7), viridis (≥ 0.6.5) |
| Suggests: | knitr, readr, rmarkdown, testthat (≥ 3.0.0), VIM |
| Published: | 2026-05-21 |
| DOI: | 10.32614/CRAN.package.pandemonium |
| Author: | Gabriel McCoy 
[aut, cre],
Ursula Laa [aut],
German Valencia
[aut] |
| Maintainer: | Gabriel McCoy <gabe.mccoy02 at gmail.com> |
| License: | MIT + file LICENSE |
| URL: | https://gabrielmccoy.github.io/pandemonium/ |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | pandemonium results |
Documentation:
| Reference manual: | pandemonium.html , pandemonium.pdf |
| Vignettes: |
Data Analysis (source, R code) Data input for pandemonium (source, R code) dimReduction (source, R code) getCoords (source, R code) getScore (source, R code) How to use make plots (source, R code) writeResults (source, R code) |
Downloads:
| Package source: | pandemonium_1.0.0.tar.gz |
| Windows binaries: | r-devel: pandemonium_0.2.4.zip, r-release: pandemonium_0.2.4.zip, r-oldrel: pandemonium_1.0.0.zip |
| macOS binaries: | r-release (arm64): pandemonium_0.2.4.tgz, r-oldrel (arm64): pandemonium_0.2.4.tgz, r-release (x86_64): pandemonium_0.2.4.tgz, r-oldrel (x86_64): pandemonium_0.2.4.tgz |
| Old sources: | pandemonium archive |
Linking:
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