Detects doublets in single-cell RNA sequencing data with the 'DoubletFinder' method of McGinnis, Murrow and Gartner (2019) <doi:10.1016/j.cels.2019.03.003>, implemented in 'Rust' to use less memory and time. Provides artificial doublet simulation, exact nearest-neighbour search and pANN (proportion of artificial nearest neighbours) scoring, and reproduces 'DoubletFinder' scores exactly.
| Version: | 0.1.0 |
| Imports: | graphics, KernSmooth, Matrix, methods, parallel, stats |
| Suggests: | knitr, rmarkdown, Seurat (≥ 5.0.0), SeuratObject (≥ 5.0.0), testthat (≥ 3.0.0) |
| Published: | 2026-10-16 |
| DOI: | 10.32614/CRAN.package.doubletrs (may not be active yet) |
| Author: | Mayank Gandhi [aut, cre, cph],
Authors of the dependency Rust crates [cph] (see inst/AUTHORS for the
bundled crates, their authors and licenses) doubletrs author details |
| Maintainer: | Mayank Gandhi <135.mayankgandhi at gmail.com> |
| BugReports: | https://github.com/mayankgandhi13/doublet-rs/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/mayankgandhi13/doublet-rs |
| NeedsCompilation: | yes |
| SystemRequirements: | Cargo (Rust's package manager), rustc >= 1.71 |
| Materials: | README, NEWS |
| CRAN checks: | doubletrs results |
| Reference manual: | doubletrs.html , doubletrs.pdf |
| Vignettes: |
Doublet detection with doubletrs (source, R code) |
| Package source: | doubletrs_0.1.0.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available |
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