citcdf: Conditional Independence Testing with Cumulative Distribution Functions

Complex hypothesis testing through conditional cumulative distribution function estimation. Method is detailed in: Gauthier M, Agniel D, ThiƩbaut R & Hejblum BP (2021). "Distribution-free complex hypothesis testing for single-cell RNA-seq differential expression analysis", bioRxiv <doi:10.1101/2021.05.21.445165>.

Version: 1.1.0
Depends: R (≥ 4.1)
Imports: ggplot2, pbapply, parallel, patchwork, RcppNumerical, survey, viridisLite
Suggests: BiocSet, bnlearn, GSA, knitr, quarto, reactable, rmarkdown, sessioninfo, SeuratObject, testthat (≥ 3.0.0)
Published: 2026-08-21
DOI: 10.32614/CRAN.package.citcdf (may not be active yet)
Author: Denis Agniel [aut], Kalidou Ba [ctb], Sara Fallet [aut], Marine Gauthier [aut], Boris P. Hejblum [aut, cre, cph], Pierre Neuvial [ctb]
Maintainer: Boris P. Hejblum <boris.hejblum at u-bordeaux.fr>
BugReports: https://github.com/sistm/citcdf/issues
License: GPL (≥ 3)
URL: https://github.com/sistm/citcdf, https://sistm.github.io/citcdf/
NeedsCompilation: no
Language: en-US
Citation: citcdf citation info
Materials: README, NEWS
CRAN checks: citcdf results

Documentation:

Reference manual: citcdf.html , citcdf.pdf
Vignettes: User guide to the citcdf R package (source, R code)

Downloads:

Package source: citcdf_1.1.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): citcdf_1.1.0.tgz, r-oldrel (arm64): citcdf_1.1.0.tgz, r-release (x86_64): citcdf_1.1.0.tgz, r-oldrel (x86_64): not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=citcdf to link to this page.