campsis: Generic PK/PD Simulation Platform Campsis
A generic, easy-to-use and intuitive
pharmacokinetic/pharmacodynamic (PK/PD) simulation platform based on
the R packages 'rxode2' and 'mrgsolve'. Campsis provides an
abstraction layer over the underlying processes of defining a PK/PD
model, assembling a custom dataset and running a simulation. The
package has a strong dependency on the R package 'campsismod', which
allows models to be read from and written to files, including through
a JSON-based interface, and to be adapted further on the fly in the R
environment. In addition, 'campsis' allows users to assemble datasets
in an intuitive manner, including via a JSON-based interface to import
Campsis datasets defined using formal JSON schemas distributed with
the package. Once the dataset is ready, the package prepares the
simulation, calls 'rxode2' or 'mrgsolve' (at the user's choice), and
returns the results for the given model, dataset and desired
simulation settings. The package itself is licensed under the GPL (>=
3); the JSON schema files shipped in inst/extdata are licensed
separately under the Creative Commons Attribution 4.0 International
(CC BY 4.0).
| Version: |
1.9.0 |
| Depends: |
campsismod, R (≥ 4.1.0) |
| Imports: |
assertthat, digest, dplyr, furrr, future, ggplot2, jsonlite, jsonvalidate, lifecycle, MASS, methods, progressr, purrr, rlang, stats, tibble, tidyr, vctrs |
| Suggests: |
bookdown, devtools, gridExtra, knitr, mrgsolve, pkgdown, rmarkdown, roxygen2, rxode2, stringr, testthat, tictoc, vdiffr, xfun |
| Published: |
2026-08-05 |
| DOI: |
10.32614/CRAN.package.campsis |
| Author: |
Nicolas Luyckx [aut, cre] |
| Maintainer: |
Nicolas Luyckx <nicolas.luyckx at calvagone.com> |
| BugReports: |
https://github.com/Calvagone/campsis/issues |
| License: |
GPL (≥ 3) |
| URL: |
https://github.com/Calvagone/campsis,
https://calvagone.github.io/,
https://calvagone.github.io/campsis.doc/ |
| NeedsCompilation: |
no |
| Language: |
en-US |
| Materials: |
README, NEWS |
| CRAN checks: |
campsis results [issues need fixing before 2026-10-07] |
Documentation:
| Reference manual: |
campsis.html , campsis.pdf
|
| Vignettes: |
Get started with Campsis (source, R code)
Create your dataset (source, R code)
Variability levels (source, R code)
Covariates (source, R code)
Bioavailability (source, R code)
Lag time (source, R code)
Infusions (source, R code)
Inter-occasion variability (source, R code)
Initial conditions (source, R code)
Simple dose adaptations (source, R code)
Replicate your study (source, R code)
Scenarios (source, R code)
Time-varying covariates (source, R code)
Interruption events (source, R code)
Complex PK/PD models from literature (source, R code)
PK/PD model library (source, R code)
Progress bar (source, R code)
Run your simulation in parallel (source, R code)
|
Downloads:
Reverse dependencies:
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