EDE: Extinction Date Estimation from Sighting Records

Estimates the historic date of extinction of a species from a time-ordered record of sighting events. Given a table of sighting counts per year, computes extinction date estimators from the sighting-record literature: optimal linear estimation under a record-value model (Roberts & Solow, 2003), nonparametric and sighting-effort-weighted persistence tests (Solow, 1993; Solow, 2005), a sighting-rate persistence test comparable across records with different observation periods (McInerny, Roberts, Davy & Cribb, 2006), a classical confidence interval on the end of a temporal range (Strauss & Sadler, 1989), a truncation-point extrapolation (Robson & Whitlock, 1964), and a combinatorial persistence test based on inclusion-exclusion over sighting-gap occupancy (Burgman, Grimson & Ferson, 1995). Every estimator is built on a single validated input object and returns a common result class with, where defined, a point estimate, a confidence interval, or a full persistence-probability curve.

Version: 0.1.0
Depends: R (≥ 4.1.0)
Suggests: testthat (≥ 3.0.0), knitr, rmarkdown, ggplot2
Published: 2026-08-07
DOI: 10.32614/CRAN.package.EDE (may not be active yet)
Author: Rodrigo Fonseca Villa ORCID iD [aut, cre]
Maintainer: Rodrigo Fonseca Villa <rodrigo03.villa at gmail.com>
BugReports: https://github.com/rodrigosqrt3/EDE/issues
License: GPL (≥ 3)
URL: https://github.com/rodrigosqrt3/EDE
NeedsCompilation: no
Language: en-US
Materials: README
CRAN checks: EDE results

Documentation:

Reference manual: EDE.html , EDE.pdf
Vignettes: Estimating extinction dates from sighting records (source, R code)

Downloads:

Package source: EDE_0.1.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

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