CRAN Package Check Results for Package vcfppR

Last updated on 2026-08-03 18:51:00 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8.3 115.49 70.76 186.25 OK
r-devel-linux-x86_64-debian-gcc 0.8.3 104.50 54.26 158.76 NOTE
r-devel-linux-x86_64-fedora-clang 0.8.3 157.00 114.15 271.15 OK
r-devel-linux-x86_64-fedora-gcc 0.8.3 105.00 48.74 153.74 WARN
r-devel-windows-x86_64 0.8.3 208.00 108.00 316.00 OK
r-patched-linux-x86_64 0.8.3 136.68 67.34 204.02 OK
r-release-linux-x86_64 0.8.3 142.87 66.73 209.60 OK
r-release-macos-arm64 0.8.3 28.00 11.00 39.00 OK
r-release-macos-x86_64 0.8.3 94.00 86.00 180.00 OK
r-release-windows-x86_64 0.8.3 216.00 114.00 330.00 OK
r-oldrel-macos-arm64 0.8.3 25.00 14.00 39.00 OK
r-oldrel-macos-x86_64 0.8.3 98.00 55.00 153.00 OK
r-oldrel-windows-x86_64 0.8.3 214.00 132.00 346.00 OK

Additional issues

gcc

Check Details

Version: 0.8.3
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0VPzza’ ‘~/tmp/scratch/Rtmp1MlBTE’ ‘~/tmp/scratch/Rtmp1koPQ5’ ‘~/tmp/scratch/Rtmp2J93Pg’ ‘~/tmp/scratch/Rtmp2OVjZn’ ‘~/tmp/scratch/Rtmp2Tz6zm’ ‘~/tmp/scratch/Rtmp3SvXCC’ ‘~/tmp/scratch/Rtmp4hju5t’ ‘~/tmp/scratch/Rtmp52HveF’ ‘~/tmp/scratch/Rtmp5QM1qI’ ‘~/tmp/scratch/Rtmp5jO92H’ ‘~/tmp/scratch/Rtmp5o7owU’ ‘~/tmp/scratch/Rtmp64ckcj’ ‘~/tmp/scratch/Rtmp6Hcx3Z’ ‘~/tmp/scratch/Rtmp6YpDQy’ ‘~/tmp/scratch/Rtmp7Vnn9H’ ‘~/tmp/scratch/Rtmp7iMrmh’ ‘~/tmp/scratch/Rtmp8omik2’ ‘~/tmp/scratch/Rtmp8pgQii’ ‘~/tmp/scratch/Rtmp90rMyM’ ‘~/tmp/scratch/RtmpAHHKy9’ ‘~/tmp/scratch/RtmpAmF6Kq’ ‘~/tmp/scratch/RtmpAqklW0’ ‘~/tmp/scratch/RtmpAu8XWv’ ‘~/tmp/scratch/RtmpBH6q8b’ ‘~/tmp/scratch/RtmpC4Cxuq’ ‘~/tmp/scratch/RtmpCkXgVu’ ‘~/tmp/scratch/RtmpD8V65W’ ‘~/tmp/scratch/RtmpDcc5TK’ ‘~/tmp/scratch/RtmpDjfVX4’ ‘~/tmp/scratch/RtmpEAnRZi’ ‘~/tmp/scratch/RtmpFY68dz’ ‘~/tmp/scratch/RtmpFebFQC’ ‘~/tmp/scratch/RtmpGjNPGF’ ‘~/tmp/scratch/RtmpHBQpc2’ ‘~/tmp/scratch/RtmpHCh28g’ ‘~/tmp/scratch/RtmpHVUwYP’ ‘~/tmp/scratch/RtmpHdlOFJ’ ‘~/tmp/scratch/RtmpHid7O7’ ‘~/tmp/scratch/RtmpHrDbag’ ‘~/tmp/scratch/RtmpIGVLjw’ ‘~/tmp/scratch/RtmpIWK1z5’ ‘~/tmp/scratch/RtmpIXmntA’ ‘~/tmp/scratch/RtmpIsHgIS’ ‘~/tmp/scratch/RtmpIxA1RV’ ‘~/tmp/scratch/RtmpIxKUT5’ ‘~/tmp/scratch/RtmpJHY8Yd’ ‘~/tmp/scratch/RtmpJZ05xN’ ‘~/tmp/scratch/RtmpKM7FsJ’ ‘~/tmp/scratch/RtmpKPnPzG’ ‘~/tmp/scratch/RtmpKyq12n’ ‘~/tmp/scratch/RtmpMPQYOE’ ‘~/tmp/scratch/RtmpMYUJOJ’ ‘~/tmp/scratch/RtmpN1Ftoj’ ‘~/tmp/scratch/RtmpPyjnlD’ ‘~/tmp/scratch/RtmpQFSJbT’ ‘~/tmp/scratch/RtmpQgVI6T’ ‘~/tmp/scratch/RtmpR39XUz’ ‘~/tmp/scratch/RtmpR76wlP’ ‘~/tmp/scratch/RtmpRKvUK2’ ‘~/tmp/scratch/RtmpTM5XXc’ ‘~/tmp/scratch/RtmpTQyuw6’ ‘~/tmp/scratch/RtmpTVpNPq’ ‘~/tmp/scratch/RtmpTwKrO5’ ‘~/tmp/scratch/RtmpUK6mXP’ ‘~/tmp/scratch/RtmpUNxr9C’ ‘~/tmp/scratch/RtmpUlTxfH’ ‘~/tmp/scratch/RtmpVsRYyI’ ‘~/tmp/scratch/RtmpWeOV0K’ ‘~/tmp/scratch/RtmpXxu2f3’ ‘~/tmp/scratch/RtmpXyoFkP’ ‘~/tmp/scratch/RtmpY7Io5M’ ‘~/tmp/scratch/RtmpYbB7iH’ ‘~/tmp/scratch/RtmpZOT01t’ ‘~/tmp/scratch/RtmpZS8KgR’ ‘~/tmp/scratch/RtmpaAJ7Zk’ ‘~/tmp/scratch/RtmpaKRJ5y’ ‘~/tmp/scratch/RtmpacEOd8’ ‘~/tmp/scratch/Rtmpb5FD5R’ ‘~/tmp/scratch/RtmpdLNHzE’ ‘~/tmp/scratch/RtmpdS6gdi’ ‘~/tmp/scratch/RtmpdSFi78’ ‘~/tmp/scratch/Rtmpdu3O4F’ ‘~/tmp/scratch/Rtmpf4gGun’ ‘~/tmp/scratch/Rtmpfc74ON’ ‘~/tmp/scratch/Rtmpfw7gRK’ ‘~/tmp/scratch/RtmpgcWMWj’ ‘~/tmp/scratch/RtmphA5Ylj’ ‘~/tmp/scratch/RtmphKaHlJ’ ‘~/tmp/scratch/RtmphOAhOt’ ‘~/tmp/scratch/Rtmphake51’ ‘~/tmp/scratch/RtmphfGSQg’ ‘~/tmp/scratch/RtmphozkGl’ ‘~/tmp/scratch/RtmpiiFawi’ ‘~/tmp/scratch/RtmpikeVEl’ ‘~/tmp/scratch/Rtmpiszqne’ ‘~/tmp/scratch/RtmpjK7Zhb’ ‘~/tmp/scratch/RtmpjQQE6U’ ‘~/tmp/scratch/Rtmpk2zr8N’ ‘~/tmp/scratch/RtmpkPIvlU’ ‘~/tmp/scratch/RtmpkV44BQ’ ‘~/tmp/scratch/RtmplG2f7l’ ‘~/tmp/scratch/RtmplaKYwz’ ‘~/tmp/scratch/Rtmplv7rPV’ ‘~/tmp/scratch/RtmplwheAZ’ ‘~/tmp/scratch/RtmpmmdfGj’ ‘~/tmp/scratch/Rtmpmmuceh’ ‘~/tmp/scratch/RtmpoyfhbW’ ‘~/tmp/scratch/RtmppNmspC’ ‘~/tmp/scratch/Rtmppozfyh’ ‘~/tmp/scratch/RtmpptrkZ5’ ‘~/tmp/scratch/RtmpqddUeo’ ‘~/tmp/scratch/Rtmpql1SIw’ ‘~/tmp/scratch/RtmpqocInl’ ‘~/tmp/scratch/RtmprHauI8’ ‘~/tmp/scratch/RtmpsAoLkF’ ‘~/tmp/scratch/RtmpsKKVPB’ ‘~/tmp/scratch/RtmpsxdnXO’ ‘~/tmp/scratch/RtmptZmgBa’ ‘~/tmp/scratch/RtmpvXrGcg’ ‘~/tmp/scratch/RtmpwiRwNp’ ‘~/tmp/scratch/RtmpwlC5vV’ ‘~/tmp/scratch/RtmpwtoRVd’ ‘~/tmp/scratch/Rtmpx9tKJM’ ‘~/tmp/scratch/RtmpxBxE4n’ ‘~/tmp/scratch/RtmpxLwWPI’ ‘~/tmp/scratch/RtmpxXs8nw’ ‘~/tmp/scratch/Rtmpz2hkQW’ ‘~/tmp/scratch/Rtmpz72KoN’ ‘~/tmp/scratch/RtmpzxHGqI’ ‘~/tmp/scratch/xvfb-run.1jFJ4J’ ‘~/tmp/scratch/xvfb-run.1oWIK5’ ‘~/tmp/scratch/xvfb-run.3Vkowd’ ‘~/tmp/scratch/xvfb-run.49glq3’ ‘~/tmp/scratch/xvfb-run.64EMrc’ ‘~/tmp/scratch/xvfb-run.6xwJv4’ ‘~/tmp/scratch/xvfb-run.8q5rID’ ‘~/tmp/scratch/xvfb-run.AJchWa’ ‘~/tmp/scratch/xvfb-run.AkO6N4’ ‘~/tmp/scratch/xvfb-run.Ax6sVS’ ‘~/tmp/scratch/xvfb-run.B21WmQ’ ‘~/tmp/scratch/xvfb-run.C0bGsw’ ‘~/tmp/scratch/xvfb-run.CiWM3U’ ‘~/tmp/scratch/xvfb-run.D0X8TW’ ‘~/tmp/scratch/xvfb-run.DWqojD’ ‘~/tmp/scratch/xvfb-run.EnX6mi’ ‘~/tmp/scratch/xvfb-run.FFHOg3’ ‘~/tmp/scratch/xvfb-run.FjhrMe’ ‘~/tmp/scratch/xvfb-run.HptwYa’ ‘~/tmp/scratch/xvfb-run.IX0tsv’ ‘~/tmp/scratch/xvfb-run.IbW0Jf’ ‘~/tmp/scratch/xvfb-run.IyD4N3’ ‘~/tmp/scratch/xvfb-run.K7x9N1’ ‘~/tmp/scratch/xvfb-run.KX1ln7’ ‘~/tmp/scratch/xvfb-run.LdTA4k’ ‘~/tmp/scratch/xvfb-run.MHtlUB’ ‘~/tmp/scratch/xvfb-run.OgGzJU’ ‘~/tmp/scratch/xvfb-run.UVbwJC’ ‘~/tmp/scratch/xvfb-run.WFJ0xN’ ‘~/tmp/scratch/xvfb-run.WWIgu1’ ‘~/tmp/scratch/xvfb-run.WmgHRJ’ ‘~/tmp/scratch/xvfb-run.WxF85w’ ‘~/tmp/scratch/xvfb-run.Z6UubO’ ‘~/tmp/scratch/xvfb-run.atW8mf’ ‘~/tmp/scratch/xvfb-run.bD3yqf’ ‘~/tmp/scratch/xvfb-run.fVMGRm’ ‘~/tmp/scratch/xvfb-run.frcOkb’ ‘~/tmp/scratch/xvfb-run.gUZgEp’ ‘~/tmp/scratch/xvfb-run.gsXq3k’ ‘~/tmp/scratch/xvfb-run.iK9HB1’ ‘~/tmp/scratch/xvfb-run.j183OE’ ‘~/tmp/scratch/xvfb-run.jvIhJZ’ ‘~/tmp/scratch/xvfb-run.kklkox’ ‘~/tmp/scratch/xvfb-run.ks2Al2’ ‘~/tmp/scratch/xvfb-run.mfP267’ ‘~/tmp/scratch/xvfb-run.ngelBf’ ‘~/tmp/scratch/xvfb-run.oL29Wn’ ‘~/tmp/scratch/xvfb-run.pdVgFW’ ‘~/tmp/scratch/xvfb-run.ptG1ua’ ‘~/tmp/scratch/xvfb-run.s3vErH’ ‘~/tmp/scratch/xvfb-run.tDLJOP’ ‘~/tmp/scratch/xvfb-run.taSjQi’ ‘~/tmp/scratch/xvfb-run.vPY6Tu’ ‘~/tmp/scratch/xvfb-run.vQqruA’ ‘~/tmp/scratch/xvfb-run.wfGrk3’ ‘~/tmp/scratch/xvfb-run.wh9BFS’ ‘~/tmp/scratch/xvfb-run.xgEEpO’ ‘~/tmp/scratch/xvfb-run.yh6mYa’ ‘~/tmp/scratch/xvfb-run.zSqyr9’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.8.3
Check: whether package can be installed
Result: WARN Found the following significant warnings: faidx.c:1042:25: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] sam.c:5294:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] cram/cram_decode.c:1229:35: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] cram/cram_io.c:2530:22: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] cram/cram_io.c:5353:29: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] hts.c:939:33: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] hts.c:1465:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] hts.c:4829:19: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] See ‘/data/localhost/ripley/R/packages/tests-devel/vcfppR.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++ (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2)’ Flavor: r-devel-linux-x86_64-fedora-gcc