Last updated on 2026-03-23 03:50:49 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.09 | 336.78 | 351.87 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 12.07 | 281.71 | 293.78 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 24.00 | 293.39 | 317.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 332.12 | 363.12 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 24.00 | 192.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.04 | 333.31 | 347.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.91 | 345.24 | 359.15 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 459.00 | 470.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 194.00 | 216.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 431.00 | 441.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 247.00 | 273.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/415s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.585, system: 0.046, elapsed: 2.154 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.542, system: 0.094, elapsed: 12.265 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.020, elapsed: 0.744 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.590, system: 0.693, elapsed: 40.718 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.173 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.691, system: 0.882, elapsed: 56.868 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.029, elapsed: 1.835 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.698, system: 0.099, elapsed: 13.607 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.017, elapsed: 1.230 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.679, system: 0.706, elapsed: 66.466 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.462 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.882, system: 0.881, elapsed: 84.464 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.028, elapsed: 3.994 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.641, system: 0.064, elapsed: 23.902 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.015, elapsed: 1.099 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.699, system: 0.756, elapsed: 95.924 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.167 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.245, system: 0.241, elapsed: 0.989 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.138, system: 1.147, elapsed: 127.339 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.041, elapsed: 2.036 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.638, system: 0.073, elapsed: 13.526 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.015, elapsed: 1.035 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.867, system: 0.774, elapsed: 93.546 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.002, elapsed: 0.184 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.908, system: 0.619, elapsed: 27.849 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.046, system: 1.553, elapsed: 139.086 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in 'mapi-Ex.R' failed
The error most likely occurred in:
> ### Name: MAPI_GridHexagonal
> ### Title: Function MAPI_GridHexagonal
> ### Aliases: MAPI_GridHexagonal
>
> ### ** Examples
>
> data("samples")
> # Builds a grid of hexagonal cells according to samples coordinates (columns x and y)
> # using the EPSG:3857 projection and an halfwidth cell value of hw=250m.
> grid <- MAPI_GridHexagonal(samples, crs=3857, hw=250)
Building local cartesian grid...
Flavor: r-release-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/386s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.042, elapsed: 2.043 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.620, system: 0.066, elapsed: 13.587 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.019, elapsed: 1.105 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.186, system: 0.631, elapsed: 25.804 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.002, elapsed: 0.194 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.343, system: 0.783, elapsed: 43.511 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.031, elapsed: 2.187 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.571, system: 0.070, elapsed: 14.055 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.014, elapsed: 0.981 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.383, system: 0.689, elapsed: 50.360 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.328 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.447, system: 0.827, elapsed: 68.735 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.530, system: 0.030, elapsed: 2.997 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.574, system: 0.050, elapsed: 17.883 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.015, elapsed: 0.989 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.896, system: 0.823, elapsed: 120.603 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.006, elapsed: 0.190 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.267, system: 0.349, elapsed: 1.144 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.339, system: 1.297, elapsed: 144.919 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.523, system: 0.032, elapsed: 2.807 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.577, system: 0.060, elapsed: 23.252 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.017, elapsed: 1.163 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.495, system: 0.738, elapsed: 78.525 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.167 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 14.678, system: 0.977, elapsed: 15.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.320, system: 1.859, elapsed: 122.259 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64