Last updated on 2025-06-16 09:49:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 4.1.4 | 7.89 | 167.61 | 175.50 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 4.1.4 | 6.00 | 106.79 | 112.79 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 4.1.5 | 273.81 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 4.1.5 | 272.66 | OK | |||
| r-devel-windows-x86_64 | 4.1.4 | 10.00 | 275.00 | 285.00 | NOTE | |
| r-patched-linux-x86_64 | 4.1.4 | 8.24 | 161.36 | 169.60 | NOTE | |
| r-release-linux-x86_64 | 4.1.4 | 6.70 | 155.82 | 162.52 | ERROR | |
| r-release-macos-arm64 | 4.1.5 | 75.00 | OK | |||
| r-release-macos-x86_64 | 4.1.4 | 180.00 | OK | |||
| r-release-windows-x86_64 | 4.1.4 | 10.00 | 267.00 | 277.00 | NOTE | |
| r-oldrel-macos-arm64 | 4.1.5 | 81.00 | OK | |||
| r-oldrel-macos-x86_64 | 4.1.4 | 163.00 | OK | |||
| r-oldrel-windows-x86_64 | 4.1.5 | 11.00 | 233.00 | 244.00 | OK |
Version: 4.1.4
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
RMixtComp-package.Rd: createAlgo, availableModels,
RMixtCompUtilities-package, getBIC, getICL, getCompletedData,
getParam, getProportion, getTik, getEmpiricTik, getPartition,
getType, getModel, getVarNames, computeDiscrimPowerClass,
computeDiscrimPowerVar, computeSimilarityClass,
computeSimilarityVar, plot.MixtComp, heatmapClass,
heatmapTikSorted, heatmapVar, histMisclassif, plotConvergence,
plotDataBoxplot, plotDataCI, plotDiscrimClass, plotDiscrimVar,
plotProportion, RMixtCompIO-package
mixtCompLearn.Rd: createAlgo, availableModels, heatmapVar
plot.MixtCompLearn.Rd: plotDataCI, plotDataBoxplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 4.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘ClusVis.Rmd’ using rmarkdown
Quitting from ClusVis.Rmd:33-36 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'ClusVis'
---
Backtrace:
▆
1. └─base::library(ClusVis)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'ClusVis.Rmd' failed with diagnostics:
there is no package called 'ClusVis'
--- failed re-building ‘ClusVis.Rmd’
--- re-building ‘MixtComp.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22386 bytes
Input file size = 22488 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20790
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 20768
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 20768
Output IDAT size = 20768 bytes (1618 bytes decrease)
Output file size = 20846 bytes (1642 bytes = 7.30% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-2.png
672x480 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 10475 bytes
Input file size = 11342 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8667
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 8644
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 8644
Output IDAT size = 8644 bytes (1831 bytes decrease)
Output file size = 8722 bytes (2620 bytes = 23.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-3.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11300 bytes
Input file size = 12170 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9825
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 9818
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 9818
Output IDAT size = 9818 bytes (1482 bytes decrease)
Output file size = 9896 bytes (2274 bytes = 18.69% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-4.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28649 bytes
Input file size = 28763 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23228
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23228
Output IDAT size = 23228 bytes (5421 bytes decrease)
Output file size = 23306 bytes (5457 bytes = 18.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-5.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24260 bytes
Input file size = 24362 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21466
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21466
Output IDAT size = 21466 bytes (2794 bytes decrease)
Output file size = 21544 bytes (2818 bytes = 11.57% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-6.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29079 bytes
Input file size = 29193 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23216
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23216
Output IDAT size = 23216 bytes (5863 bytes decrease)
Output file size = 23294 bytes (5899 bytes = 20.21% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21429 bytes
Input file size = 21531 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18811
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18811
Output IDAT size = 18811 bytes (2618 bytes decrease)
Output file size = 18889 bytes (2642 bytes = 12.27% decrease)
--- finished re-building ‘MixtComp.Rmd’
--- re-building ‘dataFormat.Rmd’ using rmarkdown
--- finished re-building ‘dataFormat.Rmd’
--- re-building ‘mixtCompObject.Rmd’ using rmarkdown
--- finished re-building ‘mixtCompObject.Rmd’
SUMMARY: processing the following file failed:
‘ClusVis.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 4.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘ClusVis.Rmd’ using rmarkdown
Quitting from ClusVis.Rmd:33-36 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'ClusVis'
---
Backtrace:
▆
1. └─base::library(ClusVis)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'ClusVis.Rmd' failed with diagnostics:
there is no package called 'ClusVis'
--- failed re-building ‘ClusVis.Rmd’
--- re-building ‘MixtComp.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23840 bytes
Input file size = 23942 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21808
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21808
Output IDAT size = 21808 bytes (2032 bytes decrease)
Output file size = 21886 bytes (2056 bytes = 8.59% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-2.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 10051 bytes
Input file size = 10921 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8375
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 8370
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 8370
Output IDAT size = 8370 bytes (1681 bytes decrease)
Output file size = 8448 bytes (2473 bytes = 22.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-3.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 12256 bytes
Input file size = 13126 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10592
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 10558
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 10558
Output IDAT size = 10558 bytes (1698 bytes decrease)
Output file size = 10636 bytes (2490 bytes = 18.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-4.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31867 bytes
Input file size = 31981 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25836
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25836
Output IDAT size = 25836 bytes (6031 bytes decrease)
Output file size = 25914 bytes (6067 bytes = 18.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-5.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26758 bytes
Input file size = 26872 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23372
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23372
Output IDAT size = 23372 bytes (3386 bytes decrease)
Output file size = 23450 bytes (3422 bytes = 12.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-8-6.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34396 bytes
Input file size = 34522 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27284
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27284
Output IDAT size = 27284 bytes (7112 bytes decrease)
Output file size = 27362 bytes (7160 bytes = 20.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/RMixtComp.Rcheck/vign_test/RMixtComp/vignettes/MixtComp_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21518 bytes
Input file size = 21620 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18902
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18902
Output IDAT size = 18902 bytes (2616 bytes decrease)
Output file size = 18980 bytes (2640 bytes = 12.21% decrease)
--- finished re-building ‘MixtComp.Rmd’
--- re-building ‘dataFormat.Rmd’ using rmarkdown
--- finished re-building ‘dataFormat.Rmd’
--- re-building ‘mixtCompObject.Rmd’ using rmarkdown
--- finished re-building ‘mixtCompObject.Rmd’
SUMMARY: processing the following file failed:
‘ClusVis.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64