Last updated on 2026-09-24 17:50:52 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.0 | 14.10 | 1009.62 | 1023.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.0 | 10.27 | 1097.65 | 1107.92 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.0 | 10.00 | 396.74 | 406.74 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.0.0 | 10.00 | 569.19 | 579.19 | OK | |
| r-devel-windows-x86_64 | 2.0.0 | 15.00 | 287.00 | 302.00 | ERROR | |
| r-patched-linux-x86_64 | 2.0.0 | 14.89 | 1176.61 | 1191.50 | OK | |
| r-release-linux-x86_64 | 2.0.0 | 13.94 | 1143.64 | 1157.58 | OK | |
| r-release-macos-arm64 | 2.0.0 | 3.00 | 148.00 | 151.00 | OK | |
| r-release-macos-x86_64 | 2.0.0 | 10.00 | 677.00 | 687.00 | OK | |
| r-release-windows-x86_64 | 2.0.0 | 15.00 | 279.00 | 294.00 | ERROR | |
| r-oldrel-macos-arm64 | 2.0.0 | 3.00 | 163.00 | 166.00 | OK | |
| r-oldrel-macos-x86_64 | 2.0.0 | 10.00 | 653.00 | 663.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.0 | 21.00 | 343.00 | 364.00 | ERROR |
Version: 2.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [165s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(GMLTM)
> test_check("GMLTM")
specified C++17
make cmd is
make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file3c31024004c17.dll" WIN=64 TCLBIN= OBJECTS="file3c31024004c17.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_17_01_50_00_14611/RtmpmsO9L9'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.7/Rcpp/include/" -I"D:/temp/2026_09_17_01_50_00_14611/Rtmpcp7wkP/RLIBS_2da60226a4a19/RcppEigen/include/" -I"D:/temp/2026_09_17_01_50_00_14611/Rtmpcp7wkP/RLIBS_2da60226a4a19/RcppEigen/include/unsupported" -I"D:/temp/2026_09_17_01_50_00_14611/Rtmpcp7wkP/RLIBS_2da60226a4a19/BH/include" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.7/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.7/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file3c31024004c17.cpp -o file3c31024004c17.o
if test "zfile3c31024004c17.o" != "z"; then \
if test -e "file3c31024004c17-win.def"; then \
echo g++ -shared -s -static-libgcc -o file3c31024004c17.dll file3c31024004c17-win.def file3c31024004c17.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file3c31024004c17.dll file3c31024004c17-win.def file3c31024004c17.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file3c31024004c17.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file3c31024004c17.dll tmp.def file3c31024004c17.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file3c31024004c17.dll tmp.def file3c31024004c17.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_17_01_50_00_14611/RtmpmsO9L9'
Saving _problems/test-data-input-64.R
specified C++17
make cmd is
make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file3c310435543c4.dll" WIN=64 TCLBIN= OBJECTS="file3c310435543c4.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_17_01_50_00_14611/RtmpmsO9L9'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.7/Rcpp/include/" -I"D:/temp/2026_09_17_01_50_00_14611/Rtmpcp7wkP/RLIBS_2da60226a4a19/RcppEigen/include/" -I"D:/temp/2026_09_17_01_50_00_14611/Rtmpcp7wkP/RLIBS_2da60226a4a19/RcppEigen/include/unsupported" -I"D:/temp/2026_09_17_01_50_00_14611/Rtmpcp7wkP/RLIBS_2da60226a4a19/BH/include" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.7/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.7/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file3c310435543c4.cpp -o file3c310435543c4.o
if test "zfile3c310435543c4.o" != "z"; then \
if test -e "file3c310435543c4-win.def"; then \
echo g++ -shared -s -static-libgcc -o file3c310435543c4.dll file3c310435543c4-win.def file3c310435543c4.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file3c310435543c4.dll file3c310435543c4-win.def file3c310435543c4.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file3c310435543c4.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file3c310435543c4.dll tmp.def file3c310435543c4.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file3c310435543c4.dll tmp.def file3c310435543c4.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_17_01_50_00_14611/RtmpmsO9L9'
Saving _problems/test-priors-50.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: l = model3c31051f12246__namespace::model3c31051f12246_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.7/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R/etc/x64/Makeconf:304: file3c31024004c17.o] Error 1
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. ├─pkgbuild::with_build_tools(...)
10. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
11. │ └─base::force(code)
12. └─inline::cxxfunction(...)
13. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. └─base::sink(type = "output")
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: l = model3c3106be06a0a__namespace::model3c3106be06a0a_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.7/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R/etc/x64/Makeconf:304: file3c310435543c4.o] Error 1
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. ├─pkgbuild::with_build_tools(...)
7. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
8. │ └─base::force(code)
9. └─inline::cxxfunction(...)
10. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. └─base::sink(type = "output")
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 2.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [159s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(GMLTM)
> test_check("GMLTM")
specified C++17
make cmd is
make -f "D:/RCompile/recent/R-4.6.1/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.6.1/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file3348455891aee.dll" WIN=64 TCLBIN= OBJECTS="file3348455891aee.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_15_23_01_57_27218/RtmpQHV4Uk'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.6.1/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/" -I"D:/temp/2026_09_15_23_01_57_27218/Rtmpspr0vR/RLIBS_3b2483ef6f04/RcppEigen/include/" -I"D:/temp/2026_09_15_23_01_57_27218/Rtmpspr0vR/RLIBS_3b2483ef6f04/RcppEigen/include/unsupported" -I"D:/temp/2026_09_15_23_01_57_27218/Rtmpspr0vR/RLIBS_3b2483ef6f04/BH/include" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.6/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.6/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file3348455891aee.cpp -o file3348455891aee.o
if test "zfile3348455891aee.o" != "z"; then \
if test -e "file3348455891aee-win.def"; then \
echo g++ -shared -s -static-libgcc -o file3348455891aee.dll file3348455891aee-win.def file3348455891aee.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file3348455891aee.dll file3348455891aee-win.def file3348455891aee.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file3348455891aee.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file3348455891aee.dll tmp.def file3348455891aee.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file3348455891aee.dll tmp.def file3348455891aee.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_15_23_01_57_27218/RtmpQHV4Uk'
Saving _problems/test-data-input-64.R
specified C++17
make cmd is
make -f "D:/RCompile/recent/R-4.6.1/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.6.1/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file334846ec6731.dll" WIN=64 TCLBIN= OBJECTS="file334846ec6731.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_15_23_01_57_27218/RtmpQHV4Uk'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.6.1/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/" -I"D:/temp/2026_09_15_23_01_57_27218/Rtmpspr0vR/RLIBS_3b2483ef6f04/RcppEigen/include/" -I"D:/temp/2026_09_15_23_01_57_27218/Rtmpspr0vR/RLIBS_3b2483ef6f04/RcppEigen/include/unsupported" -I"D:/temp/2026_09_15_23_01_57_27218/Rtmpspr0vR/RLIBS_3b2483ef6f04/BH/include" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.6/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.6/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file334846ec6731.cpp -o file334846ec6731.o
if test "zfile334846ec6731.o" != "z"; then \
if test -e "file334846ec6731-win.def"; then \
echo g++ -shared -s -static-libgcc -o file334846ec6731.dll file334846ec6731-win.def file334846ec6731.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file334846ec6731.dll file334846ec6731-win.def file334846ec6731.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file334846ec6731.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file334846ec6731.dll tmp.def file334846ec6731.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file334846ec6731.dll tmp.def file334846ec6731.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_15_23_01_57_27218/RtmpQHV4Uk'
Saving _problems/test-priors-50.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: del3348416a15bda__namespace::model3348416a15bda_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.6/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R-4.6.1/etc/x64/Makeconf:304: file3348455891aee.o] Error 1
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. ├─pkgbuild::with_build_tools(...)
10. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
11. │ └─base::force(code)
12. └─inline::cxxfunction(...)
13. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. └─base::sink(type = "output")
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: odel3348455cd67d9__namespace::model3348455cd67d9_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.6/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R-4.6.1/etc/x64/Makeconf:304: file334846ec6731.o] Error 1
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. ├─pkgbuild::with_build_tools(...)
7. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
8. │ └─base::force(code)
9. └─inline::cxxfunction(...)
10. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. └─base::sink(type = "output")
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-windows-x86_64
Version: 2.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [205s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(GMLTM)
> test_check("GMLTM")
make cmd is
make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file510204f581897.dll" WIN=64 TCLBIN= OBJECTS="file510204f581897.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_23_09_31_10_28374/RtmpYHyA0t'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_09_23_09_31_10_28374/RtmpMPJuTW/RLIBS_2e7d06369546f/RcppEigen/include/" -I"D:/temp/2026_09_23_09_31_10_28374/RtmpMPJuTW/RLIBS_2e7d06369546f/RcppEigen/include/unsupported" -I"D:/temp/2026_09_23_09_31_10_28374/RtmpMPJuTW/RLIBS_2e7d06369546f/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file510204f581897.cpp -o file510204f581897.o
if test "zfile510204f581897.o" != "z"; then \
if test -e "file510204f581897-win.def"; then \
echo g++ -shared -s -static-libgcc -o file510204f581897.dll file510204f581897-win.def file510204f581897.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file510204f581897.dll file510204f581897-win.def file510204f581897.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file510204f581897.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file510204f581897.dll tmp.def file510204f581897.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file510204f581897.dll tmp.def file510204f581897.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_23_09_31_10_28374/RtmpYHyA0t'
Saving _problems/test-data-input-64.R
make cmd is
make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file5102024fc29f0.dll" WIN=64 TCLBIN= OBJECTS="file5102024fc29f0.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_23_09_31_10_28374/RtmpYHyA0t'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_09_23_09_31_10_28374/RtmpMPJuTW/RLIBS_2e7d06369546f/RcppEigen/include/" -I"D:/temp/2026_09_23_09_31_10_28374/RtmpMPJuTW/RLIBS_2e7d06369546f/RcppEigen/include/unsupported" -I"D:/temp/2026_09_23_09_31_10_28374/RtmpMPJuTW/RLIBS_2e7d06369546f/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file5102024fc29f0.cpp -o file5102024fc29f0.o
if test "zfile5102024fc29f0.o" != "z"; then \
if test -e "file5102024fc29f0-win.def"; then \
echo g++ -shared -s -static-libgcc -o file5102024fc29f0.dll file5102024fc29f0-win.def file5102024fc29f0.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file5102024fc29f0.dll file5102024fc29f0-win.def file5102024fc29f0.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file5102024fc29f0.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file5102024fc29f0.dll tmp.def file5102024fc29f0.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file5102024fc29f0.dll tmp.def file5102024fc29f0.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_23_09_31_10_28374/RtmpYHyA0t'
Saving _problems/test-priors-50.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: del5102061555020__namespace::model5102061555020_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.5/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf:302: file510204f581897.o] Error 1
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. ├─pkgbuild::with_build_tools(...)
10. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
11. │ └─base::force(code)
12. └─inline::cxxfunction(...)
13. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. └─base::sink(type = "output")
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: model51020128ba42__namespace::model51020128ba42_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.5/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf:302: file5102024fc29f0.o] Error 1
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. ├─pkgbuild::with_build_tools(...)
7. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
8. │ └─base::force(code)
9. └─inline::cxxfunction(...)
10. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. └─base::sink(type = "output")
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64