Last updated on 2026-08-02 04:48:58 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.9 | 18.71 | 78.12 | 96.83 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.1.9 | 14.52 | 59.49 | 74.01 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.1.9 | 25.00 | 122.17 | 147.17 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 2.1.9 | 14.00 | 58.20 | 72.20 | NOTE | |
| r-devel-windows-x86_64 | 2.1.9 | 27.00 | 112.00 | 139.00 | NOTE | |
| r-patched-linux-x86_64 | 2.1.9 | 20.29 | 73.45 | 93.74 | NOTE | |
| r-release-linux-x86_64 | 2.1.9 | 19.51 | 74.74 | 94.25 | NOTE | |
| r-release-macos-arm64 | 2.1.9 | 5.00 | 24.00 | 29.00 | NOTE | |
| r-release-macos-x86_64 | 2.1.9 | 14.00 | 102.00 | 116.00 | NOTE | |
| r-release-windows-x86_64 | 2.1.9 | 27.00 | 119.00 | 146.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.1.9 | NOTE | ||||
| r-oldrel-macos-x86_64 | 2.1.9 | 13.00 | 80.00 | 93.00 | NOTE | |
| r-oldrel-windows-x86_64 | 2.1.9 | 36.00 | 130.00 | 166.00 | NOTE |
Version: 2.1.9
Check: Rd files
Result: NOTE
checkRd: (-1) getPathToAttractor.Rd:23: Lost braces; missing escapes or markup?
23 | Specifies whether the actual attractor states are included in the resulting table or not. If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. This corresponds to the behaviour prior to \pkg{BoolNet} version 1.5. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state. In this case, the sequence can be empty if the start state is an attractor state.
| ^
checkRd: (-1) plotSequence.Rd:42: Lost braces; missing escapes or markup?
42 | Specifies whether the actual attractor states are included in the plot or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) sequenceToLaTeX.Rd:37: Lost braces; missing escapes or markup?
37 | Specifies whether the actual attractor states are included in the table or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) simulateSymbolicModel.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:66-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:72-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) testNetworkProperties.Rd:131: Lost braces; missing escapes or markup?
131 | If {perturb="functions"} or \code{perturb="transitions"} and \code{accumulate=FALSE}, the function returns a vector of percentages of original attractors found in each of the perturbed copies of the original network. If \code{accumulate=TRUE}, the function returns the overall percentage of original attractors found in all perturbed copies.
| ^
checkRd: (-1) testNetworkProperties.Rd:140: Lost braces
140 | code{params} can hold parameters \code{numSamples, flipBits} corresponding to the parameters of \code{\link{perturbTrajectories}} that define how many initial states are drawn and how many bits are flipped.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.1.9
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0dRNc0’ ‘~/tmp/scratch/Rtmp0h935F’
‘~/tmp/scratch/Rtmp1KxPOO’ ‘~/tmp/scratch/Rtmp2WT8Qx’
‘~/tmp/scratch/Rtmp3XyUx0’ ‘~/tmp/scratch/Rtmp3ePjuf’
‘~/tmp/scratch/Rtmp3kJBu1’ ‘~/tmp/scratch/Rtmp3w9beH’
‘~/tmp/scratch/Rtmp5Dtpjz’ ‘~/tmp/scratch/Rtmp5ghl2X’
‘~/tmp/scratch/Rtmp6B6RhQ’ ‘~/tmp/scratch/Rtmp6bwq55’
‘~/tmp/scratch/Rtmp7TkXBq’ ‘~/tmp/scratch/Rtmp7pU2GO’
‘~/tmp/scratch/Rtmp7xmuCO’ ‘~/tmp/scratch/Rtmp82nR3f’
‘~/tmp/scratch/Rtmp834s1u’ ‘~/tmp/scratch/Rtmp8TsTkZ’
‘~/tmp/scratch/Rtmp8ff3I8’ ‘~/tmp/scratch/Rtmp9ZLwjN’
‘~/tmp/scratch/RtmpA8usvY’ ‘~/tmp/scratch/RtmpAWimNK’
‘~/tmp/scratch/RtmpBGE76W’ ‘~/tmp/scratch/RtmpBKgwl5’
‘~/tmp/scratch/RtmpCDkEAx’ ‘~/tmp/scratch/RtmpChsSzV’
‘~/tmp/scratch/RtmpEDIyJG’ ‘~/tmp/scratch/RtmpEURT9r’
‘~/tmp/scratch/RtmpEdVdvh’ ‘~/tmp/scratch/RtmpEggTlU’
‘~/tmp/scratch/RtmpEtWigV’ ‘~/tmp/scratch/RtmpF2MOIs’
‘~/tmp/scratch/RtmpF5lsk1’ ‘~/tmp/scratch/RtmpFRIrAn’
‘~/tmp/scratch/RtmpGbnmfv’ ‘~/tmp/scratch/RtmpGpEUA3’
‘~/tmp/scratch/RtmpHJxakK’ ‘~/tmp/scratch/RtmpHYwnob’
‘~/tmp/scratch/RtmpIAypuj’ ‘~/tmp/scratch/RtmpIHOFSa’
‘~/tmp/scratch/RtmpIJIvgc’ ‘~/tmp/scratch/RtmpJj4crU’
‘~/tmp/scratch/RtmpKfEFVU’ ‘~/tmp/scratch/RtmpL0ZXLJ’
‘~/tmp/scratch/RtmpLVMFtM’ ‘~/tmp/scratch/RtmpLphEV1’
‘~/tmp/scratch/RtmpLwVuoq’ ‘~/tmp/scratch/RtmpLxG10G’
‘~/tmp/scratch/RtmpMF3CYE’ ‘~/tmp/scratch/RtmpNhlgjX’
‘~/tmp/scratch/RtmpOZtaWm’ ‘~/tmp/scratch/RtmpPA1WVl’
‘~/tmp/scratch/RtmpPNC8AY’ ‘~/tmp/scratch/RtmpPt5WuT’
‘~/tmp/scratch/RtmpPzFSlO’ ‘~/tmp/scratch/RtmpQSaaAM’
‘~/tmp/scratch/RtmpQlHLkb’ ‘~/tmp/scratch/RtmpRdJiqD’
‘~/tmp/scratch/RtmpS1nEgX’ ‘~/tmp/scratch/RtmpSAb3Z6’
‘~/tmp/scratch/RtmpSO4mEG’ ‘~/tmp/scratch/RtmpSfTkPu’
‘~/tmp/scratch/RtmpT7idXE’ ‘~/tmp/scratch/RtmpTCVJwg’
‘~/tmp/scratch/RtmpTuITHv’ ‘~/tmp/scratch/RtmpUB8fXv’
‘~/tmp/scratch/RtmpUtWPJA’ ‘~/tmp/scratch/RtmpUwkUJR’
‘~/tmp/scratch/RtmpV28S1h’ ‘~/tmp/scratch/RtmpVOb2mO’
‘~/tmp/scratch/RtmpVTc4P0’ ‘~/tmp/scratch/RtmpVl2u3t’
‘~/tmp/scratch/RtmpWq1HUp’ ‘~/tmp/scratch/RtmpXhCtnf’
‘~/tmp/scratch/RtmpYYLc1p’ ‘~/tmp/scratch/RtmpYZMWZe’
‘~/tmp/scratch/RtmpYpc5Dr’ ‘~/tmp/scratch/RtmpYs1di5’
‘~/tmp/scratch/RtmpZXIq04’ ‘~/tmp/scratch/RtmpZj5IG7’
‘~/tmp/scratch/Rtmpa8iWfK’ ‘~/tmp/scratch/RtmpbiOUhQ’
‘~/tmp/scratch/RtmpcAFl0k’ ‘~/tmp/scratch/RtmpcjyB6L’
‘~/tmp/scratch/RtmpczOeEl’ ‘~/tmp/scratch/Rtmpdd241Y’
‘~/tmp/scratch/RtmpdkL5GE’ ‘~/tmp/scratch/RtmpeosX2Y’
‘~/tmp/scratch/RtmpepnCIR’ ‘~/tmp/scratch/Rtmpfh3I1c’
‘~/tmp/scratch/Rtmpg6dvLZ’ ‘~/tmp/scratch/Rtmpgscsyg’
‘~/tmp/scratch/RtmphAZpqg’ ‘~/tmp/scratch/RtmphP7S8y’
‘~/tmp/scratch/RtmpiZfVkI’ ‘~/tmp/scratch/RtmpjSgsKQ’
‘~/tmp/scratch/RtmpjxCTJw’ ‘~/tmp/scratch/RtmpkD700d’
‘~/tmp/scratch/RtmpkJWrY7’ ‘~/tmp/scratch/RtmpkJbCJX’
‘~/tmp/scratch/RtmpkixMiv’ ‘~/tmp/scratch/RtmpkmbbyD’
‘~/tmp/scratch/RtmpknW0Lj’ ‘~/tmp/scratch/Rtmpl9iOmR’
‘~/tmp/scratch/RtmpmjOXBX’ ‘~/tmp/scratch/Rtmpn2Ut0D’
‘~/tmp/scratch/RtmpnD4O2Z’ ‘~/tmp/scratch/RtmpnJyzwI’
‘~/tmp/scratch/RtmpoQyD01’ ‘~/tmp/scratch/RtmppcteYc’
‘~/tmp/scratch/RtmpqdTS9V’ ‘~/tmp/scratch/RtmprQ3DSP’
‘~/tmp/scratch/RtmprV8e5X’ ‘~/tmp/scratch/RtmprtamDj’
‘~/tmp/scratch/RtmpsG82Se’ ‘~/tmp/scratch/RtmpsSpkgj’
‘~/tmp/scratch/Rtmpu4j8Dq’ ‘~/tmp/scratch/Rtmpuf09tM’
‘~/tmp/scratch/Rtmpv3Ekia’ ‘~/tmp/scratch/RtmpvDcDHU’
‘~/tmp/scratch/Rtmpvn3ipQ’ ‘~/tmp/scratch/RtmpwL76n2’
‘~/tmp/scratch/RtmpwTFsaf’ ‘~/tmp/scratch/RtmpxWpn9r’
‘~/tmp/scratch/RtmpxfV7iS’ ‘~/tmp/scratch/Rtmpxmn9fu’
‘~/tmp/scratch/Rtmpy1mHSA’ ‘~/tmp/scratch/RtmpyCGSJZ’
‘~/tmp/scratch/RtmpyGOVfw’ ‘~/tmp/scratch/RtmpzF0CWo’
‘~/tmp/scratch/RtmpzZ36Ly’ ‘~/tmp/scratch/RtmpzdmcNP’
‘~/tmp/scratch/xvfb-run.0xV8Bx’ ‘~/tmp/scratch/xvfb-run.18SkLl’
‘~/tmp/scratch/xvfb-run.3tYJzm’ ‘~/tmp/scratch/xvfb-run.5Ey33l’
‘~/tmp/scratch/xvfb-run.69yFAj’ ‘~/tmp/scratch/xvfb-run.6MdAF3’
‘~/tmp/scratch/xvfb-run.8IycZ1’ ‘~/tmp/scratch/xvfb-run.AzPuSI’
‘~/tmp/scratch/xvfb-run.FIC62A’ ‘~/tmp/scratch/xvfb-run.FNG1oN’
‘~/tmp/scratch/xvfb-run.H5Mwmo’ ‘~/tmp/scratch/xvfb-run.I0mRHu’
‘~/tmp/scratch/xvfb-run.LehQsf’ ‘~/tmp/scratch/xvfb-run.LrRHfF’
‘~/tmp/scratch/xvfb-run.MRm7aS’ ‘~/tmp/scratch/xvfb-run.Mzaz2N’
‘~/tmp/scratch/xvfb-run.NDQtAz’ ‘~/tmp/scratch/xvfb-run.NlBscP’
‘~/tmp/scratch/xvfb-run.Otj6GU’ ‘~/tmp/scratch/xvfb-run.Ow088c’
‘~/tmp/scratch/xvfb-run.T5zrsD’ ‘~/tmp/scratch/xvfb-run.UW5kzM’
‘~/tmp/scratch/xvfb-run.VNdWDc’ ‘~/tmp/scratch/xvfb-run.VmLndr’
‘~/tmp/scratch/xvfb-run.WCPBqk’ ‘~/tmp/scratch/xvfb-run.WiE6pU’
‘~/tmp/scratch/xvfb-run.WpRgQP’ ‘~/tmp/scratch/xvfb-run.XY33TH’
‘~/tmp/scratch/xvfb-run.YYxpVm’ ‘~/tmp/scratch/xvfb-run.ZCnWvG’
‘~/tmp/scratch/xvfb-run.ZVvji6’ ‘~/tmp/scratch/xvfb-run.Zjt2YS’
‘~/tmp/scratch/xvfb-run.doYiSq’ ‘~/tmp/scratch/xvfb-run.eDFd1K’
‘~/tmp/scratch/xvfb-run.eF6dux’ ‘~/tmp/scratch/xvfb-run.hS3aBI’
‘~/tmp/scratch/xvfb-run.hdplKh’ ‘~/tmp/scratch/xvfb-run.hi4wWF’
‘~/tmp/scratch/xvfb-run.huvPao’ ‘~/tmp/scratch/xvfb-run.iaohJ1’
‘~/tmp/scratch/xvfb-run.l2H3UE’ ‘~/tmp/scratch/xvfb-run.mk1vNz’
‘~/tmp/scratch/xvfb-run.o3ykIH’ ‘~/tmp/scratch/xvfb-run.oY2DdD’
‘~/tmp/scratch/xvfb-run.qEgNIV’ ‘~/tmp/scratch/xvfb-run.r5HCDA’
‘~/tmp/scratch/xvfb-run.sUGj2J’ ‘~/tmp/scratch/xvfb-run.sqiSzh’
‘~/tmp/scratch/xvfb-run.tpljvL’ ‘~/tmp/scratch/xvfb-run.uQedyO’
‘~/tmp/scratch/xvfb-run.vpIERP’ ‘~/tmp/scratch/xvfb-run.vzNGxO’
‘~/tmp/scratch/xvfb-run.wMPhad’ ‘~/tmp/scratch/xvfb-run.wTNUpq’
‘~/tmp/scratch/xvfb-run.wwnTEq’
Flavor: r-devel-linux-x86_64-debian-gcc