chestR: Kernel-Weighted Cox Regression for Treatment Effect Heterogeneity

Explores treatment effect heterogeneity and candidate predictive biomarkers by re-fitting weighted Cox proportional hazards models on a biomarker grid. Kernel weights centred at each grid point produce local coefficient estimates that can be visualised across biomarker space. Builds on ideas related to graphical Cox treatment-covariate interaction methods [see Bonetti and Gelber (2004) <doi:10.1093/biostatistics/kxh002> and local partial-likelihood approaches Fan, Lin and Zhou (2006) <doi:10.1214/009053605000000796>].

Version: 0.1.0
Imports: survival, ggplot2, scales
Suggests: knitr, rmarkdown, mvtnorm, testthat (≥ 3.0.0)
Published: 2026-09-12
DOI: 10.32614/CRAN.package.chestR (may not be active yet)
Author: Richard Jackson [aut, cre], Caroline Jeffery [aut]
Maintainer: Richard Jackson <richj23 at liverpool.ac.uk>
License: MIT + file LICENSE
NeedsCompilation: no
Language: en-GB
Materials: README, NEWS
CRAN checks: chestR results

Documentation:

Reference manual: chestR.html , chestR.pdf
Vignettes: chestR workflow: global Cox to local biomarker maps (source, R code)

Downloads:

Package source: chestR_0.1.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

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