Last updated on 2025-07-31 23:50:40 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 252.26 | 264.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.53 | 231.63 | 242.16 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 224.00 | 245.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 168.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 155.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 281.00 | 305.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.544, system: 0.046, elapsed: 2.217 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.113, system: 0.112, elapsed: 13.141 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.263 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.867, system: 0.255, elapsed: 5.397 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.007, elapsed: 0.205 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.432, system: 0.463, elapsed: 21.993 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.579, system: 0.077, elapsed: 2.118 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.013, system: 0.198, elapsed: 15.962 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.564 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.820, system: 0.184, elapsed: 9.758 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.343 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.298, system: 0.502, elapsed: 29.798 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.031, elapsed: 3.307 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.022, system: 0.063, elapsed: 16.239 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.664, system: 0.170, elapsed: 5.152 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.264 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.174, system: 0.217, elapsed: 1.149 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.358, system: 0.513, elapsed: 27.474 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.448, system: 0.027, elapsed: 1.959 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.978, system: 0.075, elapsed: 11.697 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.204 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.641, system: 0.164, elapsed: 4.653 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.251 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.223, system: 0.445, elapsed: 15.026 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.287, system: 0.756, elapsed: 34.684 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.040, elapsed: 1.958 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.882, system: 0.086, elapsed: 11.957 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.014, elapsed: 0.238 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.422, system: 0.179, elapsed: 4.022 seconds]
Computing values for grid cells...
... done. [user: 0.152, system: 0.004, elapsed: 0.158 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.659, system: 0.341, elapsed: 18.989 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.433, system: 0.026, elapsed: 1.472 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.732, system: 0.051, elapsed: 12.195 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.382 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.556, system: 0.167, elapsed: 5.690 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.326 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.584, system: 0.284, elapsed: 20.847 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.027, elapsed: 2.567 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.902, system: 0.051, elapsed: 14.433 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.429, system: 0.158, elapsed: 5.667 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.055, system: 0.219, elapsed: 1.123 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.897, system: 0.509, elapsed: 25.459 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.477, system: 0.029, elapsed: 2.366 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.832, system: 0.048, elapsed: 11.963 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.242 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.507, system: 0.165, elapsed: 4.533 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.162 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.948, system: 0.450, elapsed: 13.099 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.750, system: 0.734, elapsed: 33.251 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64