Last updated on 2025-07-23 17:50:50 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 244.35 | 257.79 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.75 | 228.19 | 238.94 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 178.00 | 198.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 185.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 185.00 | 204.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 183.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 22.00 | 236.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/136s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.443, system: 0.035, elapsed: 3.693 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.027, system: 0.084, elapsed: 24.521 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.013, elapsed: 0.560 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.792, system: 0.203, elapsed: 9.134 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.393 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.172, system: 0.363, elapsed: 39.683 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.030, elapsed: 3.320 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.939, system: 0.049, elapsed: 15.864 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.644, system: 0.156, elapsed: 7.935 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.002, elapsed: 0.387 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.943, system: 0.270, elapsed: 28.981 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.024, elapsed: 3.714 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.967, system: 0.060, elapsed: 13.090 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.225 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.662, system: 0.207, elapsed: 5.842 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.247 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.127, system: 0.208, elapsed: 1.021 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.194, system: 0.534, elapsed: 25.204 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.547, system: 0.058, elapsed: 2.324 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.009, system: 0.210, elapsed: 12.335 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.193, elapsed: 4.928 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.179 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.140, system: 0.471, elapsed: 12.697 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.320, system: 0.990, elapsed: 33.640 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.043, elapsed: 2.235 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.925, system: 0.080, elapsed: 18.845 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.014, elapsed: 0.255 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.594, system: 0.189, elapsed: 5.543 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.959, system: 0.347, elapsed: 27.858 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.040, elapsed: 2.607 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.904, system: 0.064, elapsed: 12.035 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.010, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.597, system: 0.164, elapsed: 6.178 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.333 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.960, system: 0.311, elapsed: 22.329 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.034, elapsed: 2.885 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.988, system: 0.074, elapsed: 13.175 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.258 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.519, system: 0.162, elapsed: 5.060 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.248 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.091, system: 0.233, elapsed: 1.043 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.143, system: 0.554, elapsed: 23.751 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.031, elapsed: 2.214 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.918, system: 0.062, elapsed: 12.391 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.547, system: 0.199, elapsed: 5.106 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.006, elapsed: 0.260 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.915, system: 0.528, elapsed: 14.878 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.849, system: 0.867, elapsed: 36.088 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64