Last updated on 2026-03-05 22:52:00 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.74 | 243.38 | 256.12 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.83 | 239.44 | 251.27 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 298.64 | 320.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 340.25 | 371.25 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 196.00 | 218.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.05 | 254.94 | 269.99 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.86 | 254.60 | 270.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 359.00 | 370.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 421.00 | 431.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 254.00 | 278.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [122s/321s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.047, elapsed: 2.224 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.657, system: 0.076, elapsed: 11.923 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.020, elapsed: 0.674 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.752, system: 0.748, elapsed: 68.807 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.006, elapsed: 0.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.999, system: 0.920, elapsed: 84.576 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.043, elapsed: 1.988 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.669, system: 0.070, elapsed: 14.567 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.018, elapsed: 1.030 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.886, system: 0.793, elapsed: 101.808 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.251 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.111, system: 0.951, elapsed: 120.350 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.030, elapsed: 2.215 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.724, system: 0.064, elapsed: 14.896 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.331, system: 0.017, elapsed: 1.010 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.008, system: 0.780, elapsed: 63.000 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.005, elapsed: 0.170 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.237, system: 0.283, elapsed: 0.981 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.616, system: 1.212, elapsed: 83.193 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.033, elapsed: 1.518 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.307, system: 0.043, elapsed: 9.438 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.318, system: 0.026, elapsed: 0.213 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 11.275, system: 0.886, elapsed: 4.528 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.164 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 28.689, system: 1.125, elapsed: 10.361 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 52.225, system: 2.171, elapsed: 26.941 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [96s/376s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.566, system: 0.045, elapsed: 2.269 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.433, system: 0.059, elapsed: 11.305 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.016, elapsed: 1.027 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.168, system: 0.590, elapsed: 14.689 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.007, elapsed: 0.174 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.111, system: 0.737, elapsed: 30.230 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.534, system: 0.031, elapsed: 1.961 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.587, system: 0.075, elapsed: 14.839 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.015, elapsed: 0.915 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.688, system: 0.840, elapsed: 121.507 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.307 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.750, system: 0.982, elapsed: 140.178 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.032, elapsed: 3.524 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.513, system: 0.047, elapsed: 18.279 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.017, elapsed: 0.973 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.632, system: 0.767, elapsed: 90.375 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.010, elapsed: 0.226 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.239, system: 0.323, elapsed: 1.086 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.946, system: 1.218, elapsed: 115.572 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.036, elapsed: 2.305 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.504, system: 0.074, elapsed: 14.083 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.015, elapsed: 0.748 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.250, system: 0.641, elapsed: 38.999 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.194 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.402, system: 0.602, elapsed: 25.495 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.731, system: 1.401, elapsed: 82.791 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64