Last updated on 2026-03-01 12:50:07 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.78 | 251.23 | 265.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.91 | 217.57 | 229.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 314.60 | 347.60 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 340.25 | 371.25 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 278.82 | 294.00 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.86 | 254.60 | 270.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 909.00 | 923.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 612.00 | 623.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 246.00 | 272.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/13m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.742, system: 0.081, elapsed: 5.034 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.020, system: 0.237, elapsed: 31.320 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.032, elapsed: 1.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.872, system: 2.398, elapsed: 177.292 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.010, elapsed: 0.495 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.752, system: 3.112, elapsed: 218.449 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.694, system: 0.069, elapsed: 4.122 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.153, system: 0.351, elapsed: 19.336 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.241, system: 0.035, elapsed: 1.071 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.470, system: 2.928, elapsed: 148.005 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.007, elapsed: 0.319 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.454, system: 3.797, elapsed: 175.198 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.611, system: 0.073, elapsed: 3.723 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.989, system: 0.294, elapsed: 22.231 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.348, system: 0.040, elapsed: 1.470 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.298, system: 2.710, elapsed: 77.266 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.011, elapsed: 0.480 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.487, system: 0.567, elapsed: 3.630 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.750, system: 4.114, elapsed: 111.309 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.637, system: 0.064, elapsed: 5.149 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.065, system: 0.303, elapsed: 22.555 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.033, elapsed: 1.202 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.620, system: 4.284, elapsed: 163.721 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.018, elapsed: 0.489 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.327, system: 1.874, elapsed: 62.365 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.963, system: 7.183, elapsed: 258.600 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [116s/514s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.689, system: 0.072, elapsed: 6.251 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.922, system: 0.221, elapsed: 26.459 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.032, elapsed: 1.010 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.609, system: 1.712, elapsed: 97.136 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.013, elapsed: 0.413 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.342, system: 2.518, elapsed: 134.250 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.706, system: 0.068, elapsed: 4.333 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.333, system: 0.334, elapsed: 19.268 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.232, system: 0.032, elapsed: 1.179 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.084, system: 1.377, elapsed: 26.011 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.010, elapsed: 0.383 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.254, system: 2.234, elapsed: 53.215 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.707, system: 0.075, elapsed: 3.829 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.801, system: 0.246, elapsed: 16.339 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.031, elapsed: 0.506 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.847, system: 2.268, elapsed: 130.102 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.014, elapsed: 0.330 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.446, system: 0.649, elapsed: 3.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.050, system: 3.686, elapsed: 156.315 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.810, system: 0.091, elapsed: 3.300 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.265, system: 0.394, elapsed: 20.760 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.030, elapsed: 1.026 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.889, system: 1.779, elapsed: 81.152 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.009, elapsed: 0.304 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.415, system: 1.295, elapsed: 46.850 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.632, system: 4.030, elapsed: 155.650 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64