Last updated on 2026-09-09 13:51:43 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.0 | 11.83 | 925.29 | 937.12 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.0 | 10.09 | 925.20 | 935.29 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.0 | 11.00 | 401.05 | 412.05 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.0.0 | 10.00 | 566.51 | 576.51 | OK | |
| r-devel-windows-x86_64 | 2.0.0 | 15.00 | 273.00 | 288.00 | ERROR | |
| r-patched-linux-x86_64 | 2.0.0 | 17.01 | 1022.15 | 1039.16 | OK | |
| r-release-linux-x86_64 | 2.0.0 | 13.86 | 1051.02 | 1064.88 | OK | |
| r-release-macos-arm64 | 2.0.0 | 3.00 | 148.00 | 151.00 | OK | |
| r-release-macos-x86_64 | 2.0.0 | 10.00 | 677.00 | 687.00 | OK | |
| r-release-windows-x86_64 | 2.0.0 | 14.00 | 1393.00 | 1407.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.0 | 3.00 | 163.00 | 166.00 | OK | |
| r-oldrel-macos-x86_64 | 2.0.0 | 10.00 | 653.00 | 663.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.0 | 21.00 | 363.00 | 384.00 | ERROR |
Version: 2.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [156s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(GMLTM)
> test_check("GMLTM")
specified C++17
make cmd is
make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file35564541b6d32.dll" WIN=64 TCLBIN= OBJECTS="file35564541b6d32.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_09_29_56_3012/RtmpC4c0pT'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.7/Rcpp/include/" -I"D:/temp/2026_09_07_09_29_56_3012/RtmpCmdtKa/RLIBS_35eb841c136d2/RcppEigen/include/" -I"D:/temp/2026_09_07_09_29_56_3012/RtmpCmdtKa/RLIBS_35eb841c136d2/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_09_29_56_3012/RtmpCmdtKa/RLIBS_35eb841c136d2/BH/include" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.7/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.7/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file35564541b6d32.cpp -o file35564541b6d32.o
if test "zfile35564541b6d32.o" != "z"; then \
if test -e "file35564541b6d32-win.def"; then \
echo g++ -shared -s -static-libgcc -o file35564541b6d32.dll file35564541b6d32-win.def file35564541b6d32.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file35564541b6d32.dll file35564541b6d32-win.def file35564541b6d32.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file35564541b6d32.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file35564541b6d32.dll tmp.def file35564541b6d32.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file35564541b6d32.dll tmp.def file35564541b6d32.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_09_29_56_3012/RtmpC4c0pT'
Saving _problems/test-data-input-64.R
specified C++17
make cmd is
make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file355645a2f1e68.dll" WIN=64 TCLBIN= OBJECTS="file355645a2f1e68.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_09_29_56_3012/RtmpC4c0pT'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.7/Rcpp/include/" -I"D:/temp/2026_09_07_09_29_56_3012/RtmpCmdtKa/RLIBS_35eb841c136d2/RcppEigen/include/" -I"D:/temp/2026_09_07_09_29_56_3012/RtmpCmdtKa/RLIBS_35eb841c136d2/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_09_29_56_3012/RtmpCmdtKa/RLIBS_35eb841c136d2/BH/include" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.7/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.7/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file355645a2f1e68.cpp -o file355645a2f1e68.o
if test "zfile355645a2f1e68.o" != "z"; then \
if test -e "file355645a2f1e68-win.def"; then \
echo g++ -shared -s -static-libgcc -o file355645a2f1e68.dll file355645a2f1e68-win.def file355645a2f1e68.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file355645a2f1e68.dll file355645a2f1e68-win.def file355645a2f1e68.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file355645a2f1e68.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file355645a2f1e68.dll tmp.def file355645a2f1e68.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file355645a2f1e68.dll tmp.def file355645a2f1e68.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_09_29_56_3012/RtmpC4c0pT'
Saving _problems/test-priors-50.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: del = model355643688df9__namespace::model355643688df9_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.7/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R/etc/x64/Makeconf:304: file35564541b6d32.o] Error 1
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. ├─pkgbuild::with_build_tools(...)
10. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
11. │ └─base::force(code)
12. └─inline::cxxfunction(...)
13. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. └─base::sink(type = "output")
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: l = model35564564b419f__namespace::model35564564b419f_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.7/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R/etc/x64/Makeconf:304: file355645a2f1e68.o] Error 1
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. ├─pkgbuild::with_build_tools(...)
7. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
8. │ └─base::force(code)
9. └─inline::cxxfunction(...)
10. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. └─base::sink(type = "output")
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 2.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [219s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(GMLTM)
> test_check("GMLTM")
make cmd is
make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="filefc804be87a44.dll" WIN=64 TCLBIN= OBJECTS="filefc804be87a44.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_01_50_00_11199/Rtmpg3OX9u'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpqUER80/RLIBS_10fd47aee47aa/RcppEigen/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpqUER80/RLIBS_10fd47aee47aa/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpqUER80/RLIBS_10fd47aee47aa/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c filefc804be87a44.cpp -o filefc804be87a44.o
if test "zfilefc804be87a44.o" != "z"; then \
if test -e "filefc804be87a44-win.def"; then \
echo g++ -shared -s -static-libgcc -o filefc804be87a44.dll filefc804be87a44-win.def filefc804be87a44.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filefc804be87a44.dll filefc804be87a44-win.def filefc804be87a44.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filefc804be87a44.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o filefc804be87a44.dll tmp.def filefc804be87a44.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filefc804be87a44.dll tmp.def filefc804be87a44.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_01_50_00_11199/Rtmpg3OX9u'
Saving _problems/test-data-input-64.R
make cmd is
make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="filefc803a0431ed.dll" WIN=64 TCLBIN= OBJECTS="filefc803a0431ed.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_01_50_00_11199/Rtmpg3OX9u'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpqUER80/RLIBS_10fd47aee47aa/RcppEigen/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpqUER80/RLIBS_10fd47aee47aa/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpqUER80/RLIBS_10fd47aee47aa/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c filefc803a0431ed.cpp -o filefc803a0431ed.o
if test "zfilefc803a0431ed.o" != "z"; then \
if test -e "filefc803a0431ed-win.def"; then \
echo g++ -shared -s -static-libgcc -o filefc803a0431ed.dll filefc803a0431ed-win.def filefc803a0431ed.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filefc803a0431ed.dll filefc803a0431ed-win.def filefc803a0431ed.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filefc803a0431ed.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o filefc803a0431ed.dll tmp.def filefc803a0431ed.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filefc803a0431ed.dll tmp.def filefc803a0431ed.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_01_50_00_11199/Rtmpg3OX9u'
Saving _problems/test-priors-50.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: modelfc8062873e21__namespace::modelfc8062873e21_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.5/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf:302: filefc804be87a44.o] Error 1
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. ├─pkgbuild::with_build_tools(...)
10. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
11. │ └─base::force(code)
12. └─inline::cxxfunction(...)
13. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-data-input.R:60:3'): fitting with a plain matrix runs end to end without error (all four models) ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-data-input.R:60:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─base::suppressWarnings(...)
5. │ └─base::withCallingHandlers(...)
6. └─GMLTM::GMLTM(...)
7. └─rstan::stan_model(stan_file)
8. └─rstan:::cxxfunctionplus(...)
9. └─base::sink(type = "output")
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `compileCode(f, code, language = language, verbose = verbose)`: modelfc807d7525e4__namespace::modelfc807d7525e4_; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]'
22 | return 0.5 * z.p.transpose() * z.inv_e_metric_ * z.p;
D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
21 | double T(dense_e_point& z) {
D:/RCompile/CRANpkg/lib/4.5/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
make[1]: *** [D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf:302: filefc803a0431ed.o] Error 1
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. ├─pkgbuild::with_build_tools(...)
7. │ └─pkgbuild:::withr_with_path(rtools_path(), code)
8. │ └─base::force(code)
9. └─inline::cxxfunction(...)
10. └─inline:::compileCode(f, code, language = language, verbose = verbose)
── Error ('test-priors.R:46:3'): GMLTM fits successfully with priors$alpha$family = 'lognormal' ──
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-priors.R:46:3
2. │ └─base::withCallingHandlers(...)
3. └─GMLTM::GMLTM(...)
4. └─rstan::stan_model(stan_file)
5. └─rstan:::cxxfunctionplus(...)
6. └─base::sink(type = "output")
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 84 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64