* using log directory 'd:/Rcompile/CRANpkg/local/4.4/bigergm.Rcheck' * using R version 4.4.1 (2024-06-14 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'bigergm/DESCRIPTION' ... OK * this is package 'bigergm' version '1.2.1' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'bigergm' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 13.2.0' * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s] OK * checking whether the package can be loaded with stated dependencies ... [3s] OK * checking whether the package can be unloaded cleanly ... [3s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s] OK * checking whether the namespace can be unloaded cleanly ... [3s] OK * checking loading without being on the library search path ... [3s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [9s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [11s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [9s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [144s] ERROR Running 'testthat.R' [144s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(bigergm) Loading required package: ergm Loading required package: network 'network' 1.18.2 (2023-12-04), part of the Statnet Project * 'news(package="network")' for changes since last version * 'citation("network")' for citation information * 'https://statnet.org' for help, support, and other information 'ergm' 4.6.0 (2023-12-17), part of the Statnet Project * 'news(package="ergm")' for changes since last version * 'citation("ergm")' for citation information * 'https://statnet.org' for help, support, and other information 'ergm' 4 is a major update that introduces some backwards-incompatible changes. Please type 'news(package="ergm")' for a list of major changes. Loading required package: Rcpp > > test_check("bigergm") Compute pi for pi_s0v0w0 [1] 1 Compute pi for pi_s1v0w0 [1] 2 Compute pi for pi_s0v1w0 [1] 3 Compute pi for pi_s1v1w0 [1] 4 Compute pi for pi_s0v0w1 [1] 5 Compute pi for pi_s1v0w1 [1] 6 Compute pi for pi_s0v1w1 [1] 7 Compute pi for pi_s1v1w1 [1] 8 Compute pi for pi_s0v0w0 Compute pi for pi_s1v0w0 Compute pi for pi_s0v1w0 Compute pi for pi_s1v1w0 Compute pi for pi_s0v0w1 Compute pi for pi_s1v0w1 Compute pi for pi_s0v1w1 Compute pi for pi_s1v1w1 Compute pi for pi_s0v0w0 Compute pi for pi_s1v0w0 Compute pi for pi_s0v1w0 Compute pi for pi_s1v1w0 Compute pi for pi_s0v0w1 Compute pi for pi_s1v0w1 Compute pi for pi_s0v1w1 Compute pi for pi_s1v1w1 Compute pi for pi_s0v0w0 [1] 1 Compute pi for pi_s1v0w0 [1] 2 Compute pi for pi_s0v1w0 [1] 3 Compute pi for pi_s1v1w0 [1] 4 Compute pi for pi_s0v0w1 [1] 5 Compute pi for pi_s1v0w1 [1] 6 Compute pi for pi_s0v1w1 [1] 7 Compute pi for pi_s1v1w1 [1] 8 Compute pi for pi_s0v0w0 [1] 1 Compute pi for pi_s1v0w0 [1] 2 Compute pi for pi_s0v1w0 [1] 3 Compute pi for pi_s1v1w0 [1] 4 Compute pi for pi_s0v0w1 [1] 5 Compute pi for pi_s1v0w1 [1] 6 Compute pi for pi_s0v1w1 [1] 7 Compute pi for pi_s1v1w1 [1] 8 [ FAIL 2 | WARN 3 | SKIP 3 | PASS 184 ] ══ Skipped tests (3) ═══════════════════════════════════════════════════════════ • On CRAN (3): 'test-EM-checkpoint.R:2:3', 'test-cache.R:49:3', 'test-start-from-given-cluster.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-gof.R:401:3'): Return GOF statistics including only within-block connections ── Error in `ergm_Init_abort(e$message)`: In term 'esp' in package 'ergm': NA/NaN argument Backtrace: ▆ 1. ├─ergm::gof(...) at test-gof.R:401:3 2. └─bigergm:::gof.bigergm(...) 3. └─base::mapply(...) 4. └─bigergm (local) ``(...) 5. └─bigergm:::get_gof_stats(...) 6. └─bigergm:::to_edgewise_shared_partners_df(net, to = to) 7. ├─base::summary(net ~ esp(1:to)) 8. ├─ergm:::summary.formula(net ~ esp(1:to)) 9. │ ├─ergm::summary_formula(object, ...) 10. │ └─ergm:::summary_formula.network(object, ...) 11. │ └─ergm::ergm_model(object, basis, ...) 12. │ └─ergm::call.ErgmTerm(...) 13. │ └─base::eval(termCall, env) 14. │ └─base::eval(termCall, env) 15. └─ergm:::InitErgmTerm.esp(``, list(1:to), env = ``) 16. └─ergm:::.d_sp_impl("e", nw, arglist, cache.sp, ...) 17. └─ergm::check.ErgmTerm(...) 18. └─ergm::ergm_Init_try(arglist <- as.list(arglist)) 19. └─base::tryCatch(eval(expr, parent.frame(1)), error = function(e) ergm_Init_abort(e$message)) 20. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 21. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 22. └─value[[3L]](cond) 23. └─ergm::ergm_Init_abort(e$message) 24. └─rlang::abort(...) ── Error ('test-gof.R:462:3'): Within-connections GOF can be started from the observed network ── Error in `ergm_Init_abort(e$message)`: In term 'esp' in package 'ergm': NA/NaN argument Backtrace: ▆ 1. ├─ergm::gof(...) at test-gof.R:462:3 2. └─bigergm:::gof.bigergm(...) 3. └─base::mapply(...) 4. └─bigergm (local) ``(...) 5. └─bigergm:::get_gof_stats(...) 6. └─bigergm:::to_edgewise_shared_partners_df(net, to = to) 7. ├─base::summary(net ~ esp(1:to)) 8. ├─ergm:::summary.formula(net ~ esp(1:to)) 9. │ ├─ergm::summary_formula(object, ...) 10. │ └─ergm:::summary_formula.network(object, ...) 11. │ └─ergm::ergm_model(object, basis, ...) 12. │ └─ergm::call.ErgmTerm(...) 13. │ └─base::eval(termCall, env) 14. │ └─base::eval(termCall, env) 15. └─ergm:::InitErgmTerm.esp(``, list(1:to), env = ``) 16. └─ergm:::.d_sp_impl("e", nw, arglist, cache.sp, ...) 17. └─ergm::check.ErgmTerm(...) 18. └─ergm::ergm_Init_try(arglist <- as.list(arglist)) 19. └─base::tryCatch(eval(expr, parent.frame(1)), error = function(e) ergm_Init_abort(e$message)) 20. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 21. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 22. └─value[[3L]](cond) 23. └─ergm::ergm_Init_abort(e$message) 24. └─rlang::abort(...) [ FAIL 2 | WARN 3 | SKIP 3 | PASS 184 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [44s] OK * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... [3s] OK * DONE Status: 1 ERROR